RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 NAV1Q8NEY1 1877 aa14.2□□□□□ -0.14
SCAF11-209ENST00000547018 ASTN2O75129 1339 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-209ENST00000547018 ENC1O14682 589 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 CCDC175P0C221 793 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 SP4Q02446 784 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 KIF4BQ2VIQ3 1234 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 NIM1KQ8IY84 436 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 KIAA0895Q8NCT3 520 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 RGS22Q8NE09 1264 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 P2RX5Q93086 422 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 PDCL3Q9H2J4 239 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.19□□□□□ -0.145e-7■■■■■ 40.9
SCAF11-209ENST00000547018 ZNF70Q9UC06 446 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-209ENST00000547018 RGS17Q9UGC6 210 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-209ENST00000547018 HDAC9Q9UKV0 1011 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 PSDA5PKW4 1024 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-209ENST00000547018 FANCGO15287 622 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 ARHGAP4P98171 946 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 CCDC93Q567U6 631 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 STYK1Q6J9G0 422 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 PYM1Q9BRP8 204 aaKnown RBP14.19□□□□□ -0.14
SCAF11-209ENST00000547018 LUC7L2Q9Y383 392 aaKnown RBP14.19□□□□□ -0.14
SCAF11-209ENST00000547018 MFAP3LO75121 409 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 TMEM139Q8IV31 216 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 TPH2Q8IWU9 490 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 JDP2Q8WYK2 163 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 IKZF4Q9H2S9 585 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 PRR12Q9ULL5 1215 aa14.19□□□□□ -0.14
SCAF11-209ENST00000547018 IGKV6D-41A0A0C4DH26 115 aa14.18□□□□□ -0.14
SCAF11-209ENST00000547018 CTTNQ14247 550 aaKnown RBP14.18□□□□□ -0.14
SCAF11-209ENST00000547018 CCDC40Q4G0X9 1142 aa14.18□□□□□ -0.14
SCAF11-209ENST00000547018 ANKRD13CQ8N6S4 541 aa14.18□□□□□ -0.14
SCAF11-209ENST00000547018 PSMB7Q99436 277 aa14.18□□□□□ -0.14
SCAF11-209ENST00000547018 SCN9AQ15858 1988 aa14.18□□□□□ -0.14
SCAF11-209ENST00000547018 DDX60LQ5H9U9 1706 aaKnown RBP14.18□□□□□ -0.14
SCAF11-209ENST00000547018 H7C1D1 291 aa14.18□□□□□ -0.14
SCAF11-209ENST00000547018 STX10O60499 249 aa14.18□□□□□ -0.14
SCAF11-209ENST00000547018 RSBN1LQ6PCB5 846 aaPredicted RBP14.18□□□□□ -0.14
SCAF11-209ENST00000547018 UBXN4Q92575 508 aa14.18□□□□□ -0.14
SCAF11-209ENST00000547018 SERPINA10Q9UK55 444 aa14.18□□□□□ -0.14
SCAF11-209ENST00000547018 SPDYE2BA6NHP3 402 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 SPDYE6P0CI01 402 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 CXCL9Q07325 125 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 TBX2Q13207 712 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-209ENST00000547018 TCERG1LQ5VWI1 586 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 MTMR9Q96QG7 549 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 SEMA6BQ9H3T3 888 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 PANK4Q9NVE7 773 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 MACROD2A1Z1Q3 448 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 FAM86B1E9PN63 330 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 LAD1O00515 517 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 FAM86B2P0C5J1 330 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 SNHG28P0DPA3 235 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 BAG6P46379 1132 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 PTPROQ16827 1216 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 DLK2Q6UY11 383 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 GIMAP8Q8ND71 665 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-209ENST00000547018 AK8Q96MA6 479 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 CAMKK2Q96RR4 588 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 ZNF341Q9BYN7 854 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 SAMM50Q9Y512 469 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 STAT2P52630 851 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 ERVK-24P63145 666 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 SPAG1Q07617 926 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 KRT26Q7Z3Y9 468 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 KIAA1328Q86T90 577 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 KSR1Q8IVT5 923 aa14.17□□□□□ -0.14
SCAF11-209ENST00000547018 DUSP9Q99956 384 aaKnown RBP14.17□□□□□ -0.14
SCAF11-209ENST00000547018 MEIS2O14770 477 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 MYO1BO43795 1136 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 MED24O75448 989 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 RHOBTB3O94955 611 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 PRPHP41219 470 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 NAP1L1P55209 391 aaKnown RBP14.16□□□□□ -0.14
SCAF11-209ENST00000547018 CNNM4Q6P4Q7 775 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 CNGA4Q8IV77 575 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 RAD54LQ92698 747 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 CAPZA3Q96KX2 299 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 ARHGEF10LQ9HCE6 1279 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 RSPH10B2B2RC85 870 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 PLEKP08567 350 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-209ENST00000547018 PLA2G4BP0C869 781 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 RSPH10BP0C881 870 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 CCNE1P24864 410 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 TTI2Q6NXR4 508 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 TRIM65Q6PJ69 517 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 MB21D1Q8N884 522 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 AGBL1Q96MI9 1066 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 BHMT2Q9H2M3 363 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 CTDP1Q9Y5B0 961 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-209ENST00000547018 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.16□□□□□ -0.144e-7■■■■□ 21.2
SCAF11-209ENST00000547018 MYH8P13535 1937 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 KIF5CO60282 957 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 ALAS1P13196 640 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 RASA3Q14644 834 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 C7orf43Q8WVR3 580 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 PURBQ96QR8 312 aaKnown RBP14.16□□□□□ -0.14
SCAF11-209ENST00000547018 IDI2Q9BXS1 227 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 DEF6Q9H4E7 631 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 ABHD10Q9NUJ1 306 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms