RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 NELFCDQ8IXH7 590 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 RGS22Q8NE09 1264 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 CALML4Q96GE6 196 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 MRFAP1L1Q96HT8 127 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 GSDMAQ96QA5 445 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 EML1O00423 815 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 KLRC4O43908 158 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
CCDC38-202ENST00000546386 HS1BP3Q53T59 392 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 KRT79Q5XKE5 535 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 DDX12PQ92771 950 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 SYT17Q9BSW7 474 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 A0A0U1RQJ8 604 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 ESYT2A0FGR8 921 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 TMEM150BA6NC51 233 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 IKBKBO14920 756 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 VCAM1P19320 739 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 EIF2AK2P19525 551 aaKnown RBP13.41□□□□□ -0.26
CCDC38-202ENST00000546386 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 FAM83AQ86UY5 434 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 CCDC125Q86Z20 511 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 ATRIPQ8WXE1 791 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 ATG4CQ96DT6 458 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 WDR18Q9BV38 432 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 SRRTQ9BXP5 876 aaKnown RBP13.41□□□□□ -0.26
CCDC38-202ENST00000546386 RPAP3Q9H6T3 665 aaPredicted RBP13.41□□□□□ -0.26
CCDC38-202ENST00000546386 KBTBD4Q9NVX7 518 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 RGPD3A6NKT7 1758 aaPredicted RBP13.41□□□□□ -0.26
CCDC38-202ENST00000546386 RGPD4Q7Z3J3 1758 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 RNF225M0QZC1 329 aaPredicted RBP13.41□□□□□ -0.26
CCDC38-202ENST00000546386 MSH4O15457 936 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 ZNF500O60304 480 aaPredicted RBP13.41□□□□□ -0.26
CCDC38-202ENST00000546386 ARP10275 920 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 KLK7P49862 253 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 MTF1Q14872 753 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 R3HDMLQ9H3Y0 253 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 SPON1Q9HCB6 807 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 TELO2Q9Y4R8 837 aa13.41□□□□□ -0.26
CCDC38-202ENST00000546386 MYCLP12524 364 aaPredicted RBP13.4□□□□□ -0.26
CCDC38-202ENST00000546386 ZNF280AP59817 542 aaPredicted RBP13.4□□□□□ -0.26
CCDC38-202ENST00000546386 CCZ1BP86790 482 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 CCZ1P86791 482 aaPredicted RBP13.4□□□□□ -0.26
CCDC38-202ENST00000546386 KSR1Q8IVT5 923 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 TPH2Q8IWU9 490 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 LARP4BQ92615 738 aaKnown RBP13.4□□□□□ -0.26
CCDC38-202ENST00000546386 BPIFA3Q9BQP9 254 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 DESI2Q9BSY9 194 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 WDR11Q9BZH6 1224 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 GPRC5DQ9NZD1 345 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 ABCB7O75027 752 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 PAK1Q13153 545 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 EAPPQ56P03 285 aaPredicted RBP13.4□□□□□ -0.26
CCDC38-202ENST00000546386 ANKRD40Q6AI12 368 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 SV2BQ7L1I2 683 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 CATSPER3Q86XQ3 398 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 CCDC155Q8N6L0 562 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 KIAA0895Q8NCT3 520 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 LENG9Q96B70 501 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 TRIM47Q96LD4 638 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 CCSER1Q9C0I3 900 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 ZNF408Q9H9D4 720 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 EXOC1Q9NV70 894 aa13.4□□□□□ -0.26
CCDC38-202ENST00000546386 RSPH10B2B2RC85 870 aa13.39□□□□□ -0.27
CCDC38-202ENST00000546386 RSPH10BP0C881 870 aa13.39□□□□□ -0.27
CCDC38-202ENST00000546386 ZNF18P17022 549 aa13.39□□□□□ -0.27
CCDC38-202ENST00000546386 SFPQP23246 707 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCDC38-202ENST00000546386 ZNF658Q5TYW1 1059 aaPredicted RBP13.39□□□□□ -0.27
CCDC38-202ENST00000546386 ENOX1Q8TC92 643 aaKnown RBP13.39□□□□□ -0.27
CCDC38-202ENST00000546386 CLMNQ96JQ2 1002 aa13.39□□□□□ -0.27
CCDC38-202ENST00000546386 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
CCDC38-202ENST00000546386 KRT31Q15323 416 aa13.39□□□□□ -0.27
CCDC38-202ENST00000546386 CCDC34Q96HJ3 373 aa13.39□□□□□ -0.27
CCDC38-202ENST00000546386 ZNF536O15090 1300 aa13.39□□□□□ -0.27
CCDC38-202ENST00000546386 GCOM1H8Y6P7 765 aaPredicted RBP13.38□□□□□ -0.27
CCDC38-202ENST00000546386 N4BP3O15049 544 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 POLR2MP0CAP2 368 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 POTEJP0CG39 1038 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 PRKCSHP14314 528 aaPredicted RBP13.38□□□□□ -0.27
CCDC38-202ENST00000546386 PRPHP41219 470 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 TNFAIP1Q13829 316 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 TTLL12Q14166 644 aaPredicted RBP13.38□□□□□ -0.27
CCDC38-202ENST00000546386 GRIPAP1Q4V328 841 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 SPATA1Q5VX52 437 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
CCDC38-202ENST00000546386 LMNB1P20700 586 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 C9orf131Q5VYM1 1079 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 PPP4R3AQ6IN85 833 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 IRF2BP1Q8IU81 584 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 MTMR14Q8NCE2 650 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 BANK1Q8NDB2 785 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 CHURC1Q8WUH1 139 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 RNF39Q9H2S5 420 aa13.38□□□□□ -0.27
CCDC38-202ENST00000546386 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
CCDC38-202ENST00000546386 CTDP1Q9Y5B0 961 aaPredicted RBP13.38□□□□□ -0.27
CCDC38-202ENST00000546386 OFD1O75665 1012 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 PTPRAP18433 802 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 APBA1Q02410 837 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 RBL2Q08999 1139 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 KCNA1Q09470 495 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms