RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 RAB27AP51159 221 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 KIF11P52732 1056 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 SEC24CP53992 1094 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 CASP7P55210 303 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 MRPS25P82663 173 aaKnown RBP11.17□□□□□ -0.62
UBC-213ENST00000546120 E2F5Q15329 346 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 NAB2Q15742 525 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 SLC9C1Q4G0N8 1177 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 KCTD16Q68DU8 428 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 CHST3Q7LGC8 479 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 DZIP3Q86Y13 1208 aaKnown RBP11.17□□□□□ -0.62
UBC-213ENST00000546120 COL23A1Q86Y22 540 aaPredicted RBP11.17□□□□□ -0.62
UBC-213ENST00000546120 DHX37Q8IY37 1157 aaKnown RBP11.17□□□□□ -0.62
UBC-213ENST00000546120 SYCE1Q8N0S2 351 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 USP38Q8NB14 1042 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 ATXN2LQ8WWM7 1075 aaKnown RBP11.17□□□□□ -0.62
UBC-213ENST00000546120 RUNDC3BQ96NL0 473 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 MYD88Q99836 296 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 PHF20Q9BVI0 1012 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 TLR10Q9BXR5 811 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 ROPN1BQ9BZX4 212 aaPredicted RBP11.17□□□□□ -0.62
UBC-213ENST00000546120 ROPN1Q9HAT0 212 aaPredicted RBP11.17□□□□□ -0.62
UBC-213ENST00000546120 SLC24A3Q9HC58 644 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 SLC39A2Q9NP94 309 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
UBC-213ENST00000546120 PCDHB6Q9Y5E3 794 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 STRCP1A6NGW2 1772 aa11.17□□□□□ -0.62
UBC-213ENST00000546120 AFF2P51816 1311 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 A0A087WZG4 1122 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 MACROD2A1Z1Q3 448 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 ZNF185O15231 689 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 ABL1P00519 1130 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 GLI1P08151 1106 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 IMPDH2P12268 514 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 HSPA6P17066 643 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 AFMP43652 599 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 CARSP49589 748 aaKnown RBP11.16□□□□□ -0.62
UBC-213ENST00000546120 CUL3Q13618 768 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 EPHA10Q5JZY3 1008 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 MEI1Q5TIA1 1274 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 IRF2BP1Q8IU81 584 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 CSGALNACT2Q8N6G5 542 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 FANCBQ8NB91 859 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
UBC-213ENST00000546120 IFT81Q8WYA0 676 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 ZNF317Q96PQ6 595 aaPredicted RBP11.16□□□□□ -0.62
UBC-213ENST00000546120 TMEM237Q96Q45 408 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 TUBB6Q9BUF5 446 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 CCSER1Q9C0I3 900 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 VCX3BQ9H321 246 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 SUDS3Q9H7L9 328 aaPredicted RBP11.16□□□□□ -0.62
UBC-213ENST00000546120 LGR6Q9HBX8 967 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 VCX3AQ9NNX9 186 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 CABP5Q9NP86 173 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 KCNMB3Q9NPA1 279 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
UBC-213ENST00000546120 LRWD1Q9UFC0 647 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 INTUQ9ULD6 942 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 UTP11Q9Y3A2 253 aaKnown RBP11.16□□□□□ -0.62
UBC-213ENST00000546120 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
UBC-213ENST00000546120 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.16□□□□□ -0.62
UBC-213ENST00000546120 ADAMTS7Q9UKP4 1686 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 RNF225M0QZC1 329 aaPredicted RBP11.15□□□□□ -0.62
UBC-213ENST00000546120 RANBP6O60518 1105 aaKnown RBP11.15□□□□□ -0.62
UBC-213ENST00000546120 SMIM24O75264 130 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 PPFIA2O75334 1257 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 GFPT2O94808 682 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 GNA14O95837 355 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 SERPING1P05155 500 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 RPSAP08865 295 aaKnown RBP11.15□□□□□ -0.62
UBC-213ENST00000546120 ACADSP16219 412 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 ALDH3A1P30838 453 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 ADD2P35612 726 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 PRCPP42785 496 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 MMP13P45452 471 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 NPEPPSP55786 919 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 COPS2P61201 443 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 LRRC63Q05C16 580 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 ZNF844Q08AG5 666 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 WTAPQ15007 396 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 TTC38Q5R3I4 469 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 NUGGCQ68CJ6 796 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 TTI2Q6NXR4 508 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 CNNM4Q6P4Q7 775 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 SAMD1Q6SPF0 538 aaPredicted RBP11.15□□□□□ -0.62
UBC-213ENST00000546120 MICU3Q86XE3 530 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 RBM12BQ8IXT5 1001 aaKnown RBP11.15□□□□□ -0.62
UBC-213ENST00000546120 PROM2Q8N271 834 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 AGGF1Q8N302 714 aaeCLIP11.15□□□□□ -0.62
UBC-213ENST00000546120 SH2D3CQ8N5H7 860 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 SCFD2Q8WU76 684 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 HDAC7Q8WUI4 952 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 P2RX5Q93086 422 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 NAF1Q96HR8 494 aaKnown RBP11.15□□□□□ -0.62
UBC-213ENST00000546120 PCMTD1Q96MG8 357 aaPredicted RBP11.15□□□□□ -0.62
UBC-213ENST00000546120 NOC4LQ9BVI4 516 aaKnown RBP11.15□□□□□ -0.62
UBC-213ENST00000546120 SH3GLB2Q9NR46 395 aa11.15□□□□□ -0.62
UBC-213ENST00000546120 ARHGEF3Q9NR81 526 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms