RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PRPF38AQ8NAV1 312 aaKnown RBP9.06□□□□□ -0.96
SNHG1-223ENST00000545440 NPLOC4Q8TAT6 608 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 VTI1AQ96AJ9 217 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 GMCL1Q96IK5 515 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 IL17RBQ9NRM6 502 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 FLRT1Q9NZU1 646 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 FEM1BQ9UK73 627 aa9.06□□□□□ -0.96
SNHG1-223ENST00000545440 RAD50Q92878 1312 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 GDF9O60383 454 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 RANBP6O60518 1105 aaKnown RBP9.05□□□□□ -0.96
SNHG1-223ENST00000545440 BMP3P12645 472 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 CYBAP13498 195 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 CCND3P30281 292 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-223ENST00000545440 STAT3P40763 770 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 SLC1A4P43007 532 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 STAT2P52630 851 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 IRX6P78412 446 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-223ENST00000545440 KCTD2Q14681 263 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 SLFN13Q68D06 897 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 SNRNP48Q6IEG0 339 aaKnown RBP9.05□□□□□ -0.96
SNHG1-223ENST00000545440 CWC27Q6UX04 472 aaKnown RBP9.05□□□□□ -0.96
SNHG1-223ENST00000545440 NECAB2Q7Z6G3 386 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 STAG1Q8WVM7 1258 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 MMP19Q99542 508 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 RNF41Q9H4P4 317 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-223ENST00000545440 SLC38A10Q9HBR0 1119 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 TCP11L1Q9NUJ3 509 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 STX8Q9UNK0 236 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 KIAA1024Q9UPX6 916 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 TACC3Q9Y6A5 838 aa9.05□□□□□ -0.96
SNHG1-223ENST00000545440 J3QL48 77 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 NMT2O60551 498 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 PLA2G6O60733 806 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 COBLO75128 1261 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 ADH1AP07327 375 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 GSPT1P15170 499 aaKnown RBP9.04□□□□□ -0.96
SNHG1-223ENST00000545440 HAND2P61296 217 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 AKNAD1Q5T1N1 836 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 MFSD6Q6ZSS7 791 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 FAM160B2Q86V87 743 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 TBC1D10CQ8IV04 446 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.962e-85■□□□□ 9.7
SNHG1-223ENST00000545440 DIS3LQ8TF46 1054 aaKnown RBP9.04□□□□□ -0.96
SNHG1-223ENST00000545440 KIFC2Q96AC6 838 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 PAWRQ96IZ0 340 aaKnown RBP9.04□□□□□ -0.96
SNHG1-223ENST00000545440 MAML3Q96JK9 1138 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 DSCC1Q9BVC3 393 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 INCENPQ9NQS7 918 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 TOMM22Q9NS69 142 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 ZNF358Q9NW07 568 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 DDX20Q9UHI6 824 aaKnown RBP9.04□□□□□ -0.96
SNHG1-223ENST00000545440 NRBP1Q9UHY1 535 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 DIS3Q9Y2L1 958 aaKnown RBP9.04□□□□□ -0.96
SNHG1-223ENST00000545440 NEDD4P46934 1319 aa9.04□□□□□ -0.96
SNHG1-223ENST00000545440 H0YGN5 161 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 LILRA1O75019 489 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 ZBED4O75132 1171 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 TOP1P11387 765 aaKnown RBP9.03□□□□□ -0.96
SNHG1-223ENST00000545440 CYP2C19P33261 490 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 RRP12Q5JTH9 1297 aaKnown RBP9.03□□□□□ -0.96
SNHG1-223ENST00000545440 MSL3Q8N5Y2 521 aaKnown RBP9.03□□□□□ -0.96
SNHG1-223ENST00000545440 CHURC1Q8WUH1 139 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 DCAF4Q8WV16 495 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 ESR2Q92731 530 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 DPF3Q92784 378 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 C11orf49Q9H6J7 331 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 TOR4AQ9NXH8 423 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 FBXO40Q9UH90 709 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 CTDP1Q9Y5B0 961 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-223ENST00000545440 BAZ2BQ9UIF8 2168 aaKnown RBP9.03□□□□□ -0.96
SNHG1-223ENST00000545440 PFASO15067 1338 aa9.03□□□□□ -0.96
SNHG1-223ENST00000545440 DNAJC25-GNG10A0A024R161 153 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 TMEM232C9JQI7 657 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 DNM1LO00429 736 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 ZNF213O14771 459 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 SEPT4O43236 478 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 PRMT3O60678 531 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 PGK2P07205 417 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 COL6A1P12109 1028 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 MCCP23508 829 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 IKQ13123 557 aaPredicted RBP9.02□□□□□ -0.97
SNHG1-223ENST00000545440 IMMTQ16891 758 aaKnown RBP9.02□□□□□ -0.97
SNHG1-223ENST00000545440 ZNF792Q3KQV3 632 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 RCSD1Q6JBY9 416 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 CPXCR1Q8N123 301 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 TRPV1Q8NER1 839 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 CHST13Q8NET6 341 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 ITPKCQ96DU7 683 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 TTC14Q96N46 770 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 TMEM47Q9BQJ4 181 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 RAVER2Q9HCJ3 691 aaKnown RBP9.02□□□□□ -0.97
SNHG1-223ENST00000545440 CTNNA3Q9UI47 895 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 ISY1Q9ULR0 285 aaKnown RBP9.02□□□□□ -0.97
SNHG1-223ENST00000545440 RIPK3Q9Y572 518 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 NR2E3Q9Y5X4 410 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 ZNF536O15090 1300 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 SYNGAP1Q96PV0 1343 aa9.02□□□□□ -0.97
SNHG1-223ENST00000545440 MYH7BA7E2Y1 1941 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 CARNS1A5YM72 827 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms