RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 RRAGBQ5VZM2 374 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 ISM2Q6H9L7 571 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 SLC30A10Q6XR72 485 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 LBX2Q6XYB7 198 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 LUZP1Q86V48 1076 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 STAMQ92783 540 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 PLIN2Q99541 437 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 NUDT12Q9BQG2 462 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 TEX13BQ9BXU2 312 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 FRMPD4Q14CM0 1322 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 MSH4O15457 936 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 PLCG1P19174 1290 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 STAT3P40763 770 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 STAT6P42226 847 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 DPYDQ12882 1025 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 GRB10Q13322 594 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 IQCB1Q15051 598 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 RNF207Q6ZRF8 634 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 SLFN12Q8IYM2 578 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 TAAR1Q96RJ0 339 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 RAB34Q9BZG1 259 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 EHMT1Q9H9B1 1298 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 MAN1B1Q9UKM7 699 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 AGTPBP1Q9UPW5 1226 aa12.81□□□□□ -0.36
TNC-213ENST00000544972 MARCH6O60337 910 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 PEX10O60683 326 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 ZNF76P36508 570 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 CEP55Q53EZ4 464 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 GPAT2Q6NUI2 795 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 IL31RAQ8NI17 732 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 SMARCE1Q969G3 411 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 SLC10A4Q96EP9 437 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
TNC-213ENST00000544972 FAM20AQ96MK3 541 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 PNMA5Q96PV4 448 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 ASCC2Q9H1I8 757 aaPredicted RBP12.8□□□□□ -0.36
TNC-213ENST00000544972 KBTBD4Q9NVX7 518 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
TNC-213ENST00000544972 MEIS1O00470 390 aa12.79□□□□□ -0.36
TNC-213ENST00000544972 FKBP1BP68106 108 aa12.79□□□□□ -0.36
TNC-213ENST00000544972 BAATQ14032 418 aaPredicted RBP12.79□□□□□ -0.36
TNC-213ENST00000544972 MORC3Q14149 939 aa12.79□□□□□ -0.36
TNC-213ENST00000544972 ZRSR1Q15695 479 aaKnown RBP12.79□□□□□ -0.36
TNC-213ENST00000544972 ECM1Q16610 540 aa12.79□□□□□ -0.36
TNC-213ENST00000544972 TKFCQ3LXA3 575 aa12.79□□□□□ -0.36
TNC-213ENST00000544972 NSMFQ6X4W1 530 aa12.79□□□□□ -0.36
TNC-213ENST00000544972 DHX40Q8IX18 779 aaKnown RBP12.79□□□□□ -0.36
TNC-213ENST00000544972 RASSF8Q8NHQ8 419 aa12.79□□□□□ -0.36
TNC-213ENST00000544972 CCDC34Q96HJ3 373 aa12.79□□□□□ -0.36
TNC-213ENST00000544972 PURBQ96QR8 312 aaKnown RBP12.79□□□□□ -0.36
TNC-213ENST00000544972 GBA2Q9HCG7 927 aaPredicted RBP12.79□□□□□ -0.36
TNC-213ENST00000544972 RABGAP1Q9Y3P9 1069 aa12.79□□□□□ -0.36
TNC-213ENST00000544972 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
TNC-213ENST00000544972 ITGB5P18084 799 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 MRPS9P82933 396 aaKnown RBP12.78□□□□□ -0.36
TNC-213ENST00000544972 CUL4BQ13620 913 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 KRT79Q5XKE5 535 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 FASTKD5Q7L8L6 764 aaKnown RBP12.78□□□□□ -0.36
TNC-213ENST00000544972 PLA2G4DQ86XP0 818 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 MB21D1Q8N884 522 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 SNX29Q8TEQ0 813 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 CALML4Q96GE6 196 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 MXRA8Q9BRK3 442 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 BLZF1Q9H2G9 400 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 CUEDC2Q9H467 287 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 BLOC1S4Q9NUP1 217 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 VAV3Q9UKW4 847 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 LCTP09848 1927 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 AP5Z1O43299 807 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 CNMDO75829 334 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
TNC-213ENST00000544972 SMC2O95347 1197 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 ITGBL1O95965 494 aaPredicted RBP12.78□□□□□ -0.36
TNC-213ENST00000544972 ARP10275 920 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 HERVK_113P62684 666 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
TNC-213ENST00000544972 SNAPC2Q13487 334 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 PLS1Q14651 629 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 PGM5Q15124 567 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 TMEM119Q4V9L6 283 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 HYIQ5T013 277 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 PCNX4Q63HM2 1172 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 TRIML1Q8N9V2 468 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 ZNF526Q8TF50 670 aaPredicted RBP12.78□□□□□ -0.36
TNC-213ENST00000544972 SLC5A5Q92911 643 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 GSDMAQ96QA5 445 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 RMDN3Q96TC7 470 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 BPIFA3Q9BQP9 254 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 PDCD2LQ9BRP1 358 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 ACAD9Q9H845 621 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 A1CFQ9NQ94 594 aaKnown RBP12.78□□□□□ -0.36
TNC-213ENST00000544972 PXMP2Q9NR77 195 aa12.78□□□□□ -0.36
TNC-213ENST00000544972 PSMD10O75832 226 aa12.77□□□□□ -0.37
TNC-213ENST00000544972 BCRP11274 1271 aa12.77□□□□□ -0.37
TNC-213ENST00000544972 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.37
TNC-213ENST00000544972 CST9Q5W186 159 aa12.77□□□□□ -0.37
TNC-213ENST00000544972 KCNK18Q7Z418 384 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms