RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 TTC41PQ6P2S7 1318 aa17.17■□□□□ 0.34
COPS7A-220ENST00000544725 MRE11P49959 708 aa17.16■□□□□ 0.34
COPS7A-220ENST00000544725 PTPROQ16827 1216 aa17.16■□□□□ 0.34
COPS7A-220ENST00000544725 RGS22Q8NE09 1264 aa17.16■□□□□ 0.34
COPS7A-220ENST00000544725 KCNH6Q9H252 994 aa17.16■□□□□ 0.34
COPS7A-220ENST00000544725 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
COPS7A-220ENST00000544725 TOMM22Q9NS69 142 aa17.16■□□□□ 0.34
COPS7A-220ENST00000544725 TRIP12Q14669 1992 aaPredicted RBP17.16■□□□□ 0.34
COPS7A-220ENST00000544725 FOXP2O15409 715 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 DCXO43602 365 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 PDHBP11177 359 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 ARHGAP1Q07960 439 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 PTK7Q13308 1070 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 DGKDQ16760 1214 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 LY6KQ17RY6 165 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 TCTN1Q2MV58 587 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 CHST3Q7LGC8 479 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 NEK9Q8TD19 979 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 MRPL38Q96DV4 380 aaKnown RBP17.15■□□□□ 0.34
COPS7A-220ENST00000544725 C17orf80Q9BSJ5 609 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 KATNAL1Q9BW62 490 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 MAF1Q9H063 256 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 HDAC6Q9UBN7 1215 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 FAM50BQ9Y247 325 aa17.15■□□□□ 0.34
COPS7A-220ENST00000544725 WDFY4Q6ZS81 3184 aa17.14■□□□□ 0.33
COPS7A-220ENST00000544725 AMHP03971 560 aa17.14■□□□□ 0.33
COPS7A-220ENST00000544725 FGRP09769 529 aa17.14■□□□□ 0.33
COPS7A-220ENST00000544725 PSEN2P49810 448 aa17.14■□□□□ 0.33
COPS7A-220ENST00000544725 TIGD5Q53EQ6 642 aa17.14■□□□□ 0.33
COPS7A-220ENST00000544725 SEPT14Q6ZU15 432 aa17.14■□□□□ 0.33
COPS7A-220ENST00000544725 SAMD11Q96NU1 681 aa17.14■□□□□ 0.33
COPS7A-220ENST00000544725 TCP11L1Q9NUJ3 509 aa17.14■□□□□ 0.33
COPS7A-220ENST00000544725 LGR5O75473 907 aa17.13■□□□□ 0.33
COPS7A-220ENST00000544725 NHLH1Q02575 133 aa17.13■□□□□ 0.33
COPS7A-220ENST00000544725 ZNF543Q08ER8 600 aa17.13■□□□□ 0.33
COPS7A-220ENST00000544725 STXBP2Q15833 593 aa17.13■□□□□ 0.33
COPS7A-220ENST00000544725 USH1GQ495M9 461 aa17.13■□□□□ 0.33
COPS7A-220ENST00000544725 RRP12Q5JTH9 1297 aaKnown RBP17.13■□□□□ 0.33
COPS7A-220ENST00000544725 PI4K2BQ8TCG2 481 aa17.13■□□□□ 0.33
COPS7A-220ENST00000544725 NSUN6Q8TEA1 469 aaKnown RBP17.13■□□□□ 0.33
COPS7A-220ENST00000544725 ALG1Q9BT22 464 aa17.13■□□□□ 0.33
COPS7A-220ENST00000544725 EMSYQ7Z589 1322 aa17.13■□□□□ 0.33
COPS7A-220ENST00000544725 SIP14410 1827 aa17.12■□□□□ 0.33
COPS7A-220ENST00000544725 POTEB3A0JP26 581 aa17.12■□□□□ 0.33
COPS7A-220ENST00000544725 H3BQ06 376 aaPredicted RBP17.12■□□□□ 0.33
COPS7A-220ENST00000544725 HTRA4P83105 476 aaPredicted RBP17.12■□□□□ 0.33
COPS7A-220ENST00000544725 MFSD10Q14728 455 aa17.12■□□□□ 0.33
COPS7A-220ENST00000544725 TRIM71Q2Q1W2 868 aaKnown RBP17.12■□□□□ 0.33
COPS7A-220ENST00000544725 ZNF618Q5T7W0 954 aa17.12■□□□□ 0.33
COPS7A-220ENST00000544725 TRAF7Q6Q0C0 670 aa17.12■□□□□ 0.33
COPS7A-220ENST00000544725 POTEBQ6S5H4 581 aa17.12■□□□□ 0.33
COPS7A-220ENST00000544725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.12■□□□□ 0.33
COPS7A-220ENST00000544725 MYOCDQ8IZQ8 938 aa17.12■□□□□ 0.33
COPS7A-220ENST00000544725 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
COPS7A-220ENST00000544725 IWS1Q96ST2 819 aa17.12■□□□□ 0.33
COPS7A-220ENST00000544725 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
COPS7A-220ENST00000544725 F2P00734 622 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 SNHG28P0DPA3 235 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 LAMC2Q13753 1193 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 MBTPS1Q14703 1052 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 ALX1Q15699 326 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 EPC2Q52LR7 807 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 GPATCH4Q5T3I0 446 aaKnown RBP17.11■□□□□ 0.33
COPS7A-220ENST00000544725 VPS53Q5VIR6 699 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 EMID1Q96A84 441 aaPredicted RBP17.11■□□□□ 0.33
COPS7A-220ENST00000544725 PABPC5Q96DU9 382 aaKnown RBP17.11■□□□□ 0.33
COPS7A-220ENST00000544725 FBXL18Q96ME1 805 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 TTC14Q96N46 770 aa17.11■□□□□ 0.33
COPS7A-220ENST00000544725 HAS3O00219 553 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 ZP2Q05996 745 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 EP400NLQ6ZTU2 488 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 MCF2L2Q86YR7 1114 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 DHX37Q8IY37 1157 aaKnown RBP17.1■□□□□ 0.33
COPS7A-220ENST00000544725 DBF4BQ8NFT6 615 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 PPTC7Q8NI37 304 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 SYTL5Q8TDW5 730 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-220ENST00000544725 WNT8BQ93098 351 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 TAAR1Q96RJ0 339 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 RMDN3Q96TC7 470 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 UPF3BQ9BZI7 483 aaKnown RBP17.1■□□□□ 0.33
COPS7A-220ENST00000544725 DDX41Q9UJV9 622 aaKnown RBP17.1■□□□□ 0.33
COPS7A-220ENST00000544725 TRIOO75962 3097 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 ABCB11O95342 1321 aa17.1■□□□□ 0.33
COPS7A-220ENST00000544725 H3BNC9 293 aa17.09■□□□□ 0.33
COPS7A-220ENST00000544725 ZNF286BP0CG31 522 aa17.09■□□□□ 0.33
COPS7A-220ENST00000544725 GPM6BQ13491 265 aa17.09■□□□□ 0.33
COPS7A-220ENST00000544725 TCEAL5Q5H9L2 206 aa17.09■□□□□ 0.33
COPS7A-220ENST00000544725 YME1L1Q96TA2 773 aa17.09■□□□□ 0.33
COPS7A-220ENST00000544725 NSUN3Q9H649 340 aaKnown RBP17.09■□□□□ 0.33
COPS7A-220ENST00000544725 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
COPS7A-220ENST00000544725 RSPH10B2B2RC85 870 aa17.08■□□□□ 0.32
COPS7A-220ENST00000544725 EIF3JO75822 258 aaKnown RBP17.08■□□□□ 0.32
COPS7A-220ENST00000544725 RSPH10BP0C881 870 aa17.08■□□□□ 0.32
COPS7A-220ENST00000544725 THPOP40225 353 aa17.08■□□□□ 0.32
COPS7A-220ENST00000544725 ZNF200P98182 395 aaPredicted RBP17.08■□□□□ 0.32
COPS7A-220ENST00000544725 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
COPS7A-220ENST00000544725 COL19A1Q14993 1142 aa17.08■□□□□ 0.32
COPS7A-220ENST00000544725 C20orf194Q5TEA3 1177 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms