RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 IVLP07476 585 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 RHOXF2BP0C7M4 288 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 IDEP14735 1019 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 MAPK8IP2Q13387 824 aaPredicted RBP14.46□□□□□ -0.09
CPSF7-223ENST00000544669 MCM6Q14566 821 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 CASP8Q14790 479 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 ZNF572Q7Z3I7 529 aaPredicted RBP14.46□□□□□ -0.09
CPSF7-223ENST00000544669 CACNA2D4Q7Z3S7 1137 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 KIAA0895Q8NCT3 520 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 RHOXF2Q9BQY4 288 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 EPC1Q9H2F5 836 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 DHX36Q9H2U1 1008 aaKnown RBP14.46□□□□□ -0.09
CPSF7-223ENST00000544669 SLC39A2Q9NP94 309 aa14.46□□□□□ -0.09
CPSF7-223ENST00000544669 DDX25Q9UHL0 483 aaKnown RBP14.46□□□□□ -0.09
CPSF7-223ENST00000544669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.45□□□□□ -0.1
CPSF7-223ENST00000544669 TBX3O15119 743 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 PJA2O43164 708 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 FCER1AP12319 257 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 PAFAH1B1P43034 410 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 CLK2P49760 499 aaKnown RBP14.45□□□□□ -0.1
CPSF7-223ENST00000544669 MARSP56192 900 aaKnown RBP14.45□□□□□ -0.1
CPSF7-223ENST00000544669 EHHADHQ08426 723 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 AP3B2Q13367 1082 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 GRIK5Q16478 980 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 CCDC96Q2M329 555 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 SLC9C1Q4G0N8 1177 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 GLE1Q53GS7 698 aaKnown RBP14.45□□□□□ -0.1
CPSF7-223ENST00000544669 HAUS3Q68CZ6 603 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 LEKR1Q6ZMV7 388 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 ERMNQ8TAM6 284 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 PNMA5Q96PV4 448 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 PNKPQ96T60 521 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 ZC3H12CQ9C0D7 883 aaKnown RBP14.45□□□□□ -0.1
CPSF7-223ENST00000544669 UBA5Q9GZZ9 404 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 PSTPIP2Q9H939 334 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 JADE2Q9NQC1 790 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 ADAM21Q9UKJ8 722 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 SIK3Q9Y2K2 1263 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 PCDHA13Q9Y5I0 950 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 PITPNM2Q9BZ72 1349 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 THSD7AQ9UPZ6 1657 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 LY75O60449 1722 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 A6NNZ2 444 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 AARSP49588 968 aaKnown RBP eCLIP14.45□□□□□ -0.1
CPSF7-223ENST00000544669 TUBB8Q3ZCM7 444 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 C10orf76Q5T2E6 689 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 MMGT1Q8N4V1 131 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 GOLGA5Q8TBA6 731 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 DCAF4Q8WV16 495 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 DDX12PQ92771 950 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 MTMR8Q96EF0 704 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 MMRN2Q9H8L6 949 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 CEP72Q9P209 647 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 COL4A3BPQ9Y5P4 624 aa14.45□□□□□ -0.1
CPSF7-223ENST00000544669 DDX60LQ5H9U9 1706 aaKnown RBP14.44□□□□□ -0.1
CPSF7-223ENST00000544669 A0A0U1RQG5 324 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-223ENST00000544669 FOSP01100 380 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-223ENST00000544669 GYS1P13807 737 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 ALDH1B1P30837 517 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 TNNI2P48788 182 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 VSNL1P62760 191 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 C2CD5Q86YS7 1000 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 ADGRF4Q8IZF3 695 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 SH2D4AQ9H788 454 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 JMJD4Q9H9V9 463 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 SNX12Q9UMY4 172 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 ATP6V0A2Q9Y487 856 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 HYOU1Q9Y4L1 999 aa14.44□□□□□ -0.1
CPSF7-223ENST00000544669 CYP3A7-CYP3A51PA0A087WV96 503 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 A0A0U1RQJ8 604 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 RASSF10A6NK89 507 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 PPEF1O14829 653 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-223ENST00000544669 ONECUT3O60422 494 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-223ENST00000544669 NPM3O75607 178 aaKnown RBP14.43□□□□□ -0.1
CPSF7-223ENST00000544669 ATP1A1P05023 1023 aaKnown RBP14.43□□□□□ -0.1
CPSF7-223ENST00000544669 CYP3A7P24462 503 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 ANXA13P27216 316 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 MAGEA1P43355 309 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 KIF11P52732 1056 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 FKBP1AP62942 108 aaKnown RBP14.43□□□□□ -0.1
CPSF7-223ENST00000544669 GTF2IP78347 998 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 EDRF1Q3B7T1 1238 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 FAM26FQ5R3K3 315 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 ATRIPQ8WXE1 791 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 MKL1Q969V6 931 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 NOX5Q96PH1 765 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 PDE11AQ9HCR9 933 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 ST7Q9NRC1 585 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 PANK4Q9NVE7 773 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 POLLQ9UGP5 575 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 BZW2Q9Y6E2 419 aaKnown RBP14.43□□□□□ -0.1
CPSF7-223ENST00000544669 RBAK-RBAKDNI3L0D1 243 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 SERPING1P05155 500 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 HDLBPQ00341 1268 aaKnown RBP14.43□□□□□ -0.1
CPSF7-223ENST00000544669 CCDC40Q4G0X9 1142 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 NCAPH2Q6IBW4 605 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 DPP8Q6V1X1 898 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-223ENST00000544669 TEKT1Q969V4 418 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 COA7Q96BR5 231 aa14.43□□□□□ -0.1
CPSF7-223ENST00000544669 CRACR2AQ9BSW2 395 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms