RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PTCH2Q9Y6C5 1203 aa7.71□□□□□ -1.18
CPSF7-222ENST00000544585 DLL1O00548 723 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 WNT10BO00744 389 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 HOXB7P09629 217 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 ADH6P28332 368 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 CDC25BP30305 580 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 NBPF9Q3BBW0 867 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 CCDC152Q4G0S7 254 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 PRAMEF18Q5VWM3 479 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 PSAPL1Q6NUJ1 521 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 FAM117BQ6P1L5 589 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 SV2AQ7L0J3 742 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 EEPD1Q7L9B9 569 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 HDXQ7Z353 690 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 VWA5B2Q8N398 1253 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 SYNPOQ8N3V7 929 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 GPBAR1Q8TDU6 330 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 TTC9Q92623 222 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 ZNF669Q96BR6 464 aaPredicted RBP7.7□□□□□ -1.18
CPSF7-222ENST00000544585 ERO1AQ96HE7 468 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 CHMP4AQ9BY43 222 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 ZMYM5Q9UJ78 669 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 PTPN22Q9Y2R2 807 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 SNCAIPQ9Y6H5 919 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 XDHP47989 1333 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 MYO3BQ8WXR4 1341 aa7.7□□□□□ -1.18
CPSF7-222ENST00000544585 ZNF609O15014 1411 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 ADARB2-AS1A8MUL3 147 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 GFRA2O00451 464 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 CHL1O00533 1208 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 PDE8AO60658 829 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 RGS9O75916 674 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-222ENST00000544585 ASMTLO95671 621 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 ZBTB48P10074 688 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-222ENST00000544585 MASP1P48740 699 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 CDK8P49336 464 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 FXR1P51114 621 aaKnown RBP eCLIP7.69□□□□□ -1.18
CPSF7-222ENST00000544585 NCAPHQ15003 741 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 STRIP1Q5VSL9 837 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 VHLLQ6RSH7 139 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 OTOP1Q7RTM1 612 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 NBPF11Q86T75 865 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 APOBEC3FQ8IUX4 373 aaKnown RBP7.69□□□□□ -1.18
CPSF7-222ENST00000544585 ANKRD18AQ8IVF6 992 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 TAB3Q8N5C8 712 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-222ENST00000544585 ELMO3Q96BJ8 720 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 R3HDMLQ9H3Y0 253 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 CACNA2D2Q9NY47 1150 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 GMIPQ9P107 970 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 KLHL42Q9P2K6 505 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 DACH1Q9UI36 760 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 ANKRD36CQ5JPF3 1778 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 CUL9Q8IWT3 2517 aa7.69□□□□□ -1.18
CPSF7-222ENST00000544585 ARAFP10398 606 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 PLCG1P19174 1290 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 MX2P20592 715 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 ALAS2P22557 587 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 TMPOP42166 694 aaKnown RBP7.68□□□□□ -1.18
CPSF7-222ENST00000544585 AMPD3Q01432 767 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 PDE4BQ07343 736 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 C19orf57Q0VDD7 668 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 POU4F3Q15319 338 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 TKFCQ3LXA3 575 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 SUPT20HL1Q3ZLR7 823 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 TTLL5Q6EMB2 1281 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 CCDC191Q8NCU4 936 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 ZSWIM2Q8NEG5 633 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 PLPPR2Q96GM1 343 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 CDC5LQ99459 802 aaKnown RBP7.68□□□□□ -1.18
CPSF7-222ENST00000544585 COA1Q9GZY4 146 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 KRT82Q9NSB4 513 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 CHPF2Q9P2E5 772 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 REV1Q9UBZ9 1251 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 ANGEL1Q9UNK9 670 aaKnown RBP7.68□□□□□ -1.18
CPSF7-222ENST00000544585 PPME1Q9Y570 386 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 CORINQ9Y5Q5 1042 aa7.68□□□□□ -1.18
CPSF7-222ENST00000544585 PCCAP05165 728 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-222ENST00000544585 EN2P19622 333 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-222ENST00000544585 SP3Q02447 781 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 PRKG1Q13976 671 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 INPP5AQ14642 412 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 DACT2Q5SW24 774 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 HGSNATQ68CP4 663 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 OVOS1Q6IE37 1185 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 MRM1Q6IN84 353 aaKnown RBP7.67□□□□□ -1.18
CPSF7-222ENST00000544585 LRFN4Q6PJG9 635 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 UNC5AQ6ZN44 842 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 NLRC3Q7RTR2 1065 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 IL22RA1Q8N6P7 574 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 NUDT8Q8WV74 236 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 WNT8BQ93098 351 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 TRIM47Q96LD4 638 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 PHAXQ9H814 394 aaKnown RBP7.67□□□□□ -1.18
CPSF7-222ENST00000544585 BSDC1Q9NW68 430 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-222ENST00000544585 SCAF8Q9UPN6 1271 aaKnown RBP7.67□□□□□ -1.18
CPSF7-222ENST00000544585 TACC3Q9Y6A5 838 aa7.67□□□□□ -1.18
CPSF7-222ENST00000544585 KIAA0100Q14667 2235 aaKnown RBP7.67□□□□□ -1.18
CPSF7-222ENST00000544585 LAMB4A4D0S4 1761 aa7.66□□□□□ -1.18
CPSF7-222ENST00000544585 ELOA3CA0A087WX78 387 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-222ENST00000544585 ELOA3DA6NLF2 546 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms