RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 ZNF552Q9H707 407 aaPredicted RBP7.74□□□□□ -1.17
LEMD3-205ENST00000544506 KCNK12Q9HB15 430 aa7.74□□□□□ -1.17
LEMD3-205ENST00000544506 TRIM39Q9HCM9 518 aa7.74□□□□□ -1.17
LEMD3-205ENST00000544506 PCDHA9Q9Y5H5 950 aa7.74□□□□□ -1.17
LEMD3-205ENST00000544506 PCDHA8Q9Y5H6 950 aa7.74□□□□□ -1.17
LEMD3-205ENST00000544506 CD2APQ9Y5K6 639 aa7.74□□□□□ -1.17
LEMD3-205ENST00000544506 RASGRP1O95267 797 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 CRTAMO95727 393 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 SOD2P04179 222 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 YBX1P67809 324 aaKnown RBP7.73□□□□□ -1.17
LEMD3-205ENST00000544506 GUCY1A3Q02108 690 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 FGD2Q7Z6J4 655 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 SCLYQ96I15 445 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 JAM3Q9BX67 310 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 IPPKQ9H8X2 491 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 DCP1AQ9NPI6 582 aaPredicted RBP7.73□□□□□ -1.17
LEMD3-205ENST00000544506 SIT1Q9Y3P8 196 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 HCFC2Q9Y5Z7 792 aa7.73□□□□□ -1.17
LEMD3-205ENST00000544506 F8W031 263 aaPredicted RBP7.72□□□□□ -1.17
LEMD3-205ENST00000544506 ARVCFO00192 962 aa7.72□□□□□ -1.17
LEMD3-205ENST00000544506 HRKO00198 91 aa7.72□□□□□ -1.17
LEMD3-205ENST00000544506 NAT1P18440 290 aa7.72□□□□□ -1.17
LEMD3-205ENST00000544506 MAPKAPK2P49137 400 aa7.72□□□□□ -1.17
LEMD3-205ENST00000544506 PABPC4Q13310 644 aaKnown RBP eCLIP7.72□□□□□ -1.17
LEMD3-205ENST00000544506 DCP2Q8IU60 420 aaKnown RBP7.72□□□□□ -1.17
LEMD3-205ENST00000544506 EPB41L1Q9H4G0 881 aa7.72□□□□□ -1.17
LEMD3-205ENST00000544506 DBR1Q9UK59 544 aaKnown RBP7.72□□□□□ -1.17
LEMD3-205ENST00000544506 NUDT5Q9UKK9 219 aa7.72□□□□□ -1.17
LEMD3-205ENST00000544506 MYOCOSA0A1B0GUC4 107 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 ABLIM1O14639 778 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 SMARCA5O60264 1052 aaPredicted RBP7.71□□□□□ -1.18
LEMD3-205ENST00000544506 VIPR1P32241 457 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 SLC6A11P48066 632 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 TMEM62Q0P6H9 643 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 PAK1Q13153 545 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 C21orf62-AS1Q17RA5 79 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 PLEKHG4Q58EX7 1191 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 ZC3H14Q6PJT7 736 aaKnown RBP7.71□□□□□ -1.18
LEMD3-205ENST00000544506 TMC6Q7Z403 805 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 KIAA0907Q7Z7F0 614 aaPredicted RBP7.71□□□□□ -1.18
LEMD3-205ENST00000544506 FEZ1Q99689 392 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 RNF114Q9Y508 228 aa7.71□□□□□ -1.18
LEMD3-205ENST00000544506 FAM47E-STBD1D6RA91 191 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 RFPL3O75679 317 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 PRR5P85299 388 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 OLFML2BQ68BL8 750 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 PCDH19Q8TAB3 1148 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.7□□□□□ -1.18
LEMD3-205ENST00000544506 SEC14L1Q92503 715 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 PEX11GQ96HA9 241 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 MAGEB10Q96LZ2 347 aaPredicted RBP7.7□□□□□ -1.18
LEMD3-205ENST00000544506 KCNJ15Q99712 375 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 MCOLN1Q9GZU1 580 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 AP5M1Q9H0R1 490 aa7.7□□□□□ -1.18
LEMD3-205ENST00000544506 SGSM2O43147 1006 aa7.69□□□□□ -1.18
LEMD3-205ENST00000544506 PAX4O43316 350 aa7.69□□□□□ -1.18
LEMD3-205ENST00000544506 PEX10O60683 326 aa7.69□□□□□ -1.18
LEMD3-205ENST00000544506 DGKIO75912 1065 aa7.69□□□□□ -1.18
LEMD3-205ENST00000544506 DNAJC8O75937 253 aaPredicted RBP7.69□□□□□ -1.18
LEMD3-205ENST00000544506 HSD3B2P26439 372 aa7.69□□□□□ -1.18
LEMD3-205ENST00000544506 SRSF3P84103 164 aaKnown RBP7.69□□□□□ -1.18
LEMD3-205ENST00000544506 ZC3H7AQ8IWR0 971 aaKnown RBP7.69□□□□□ -1.18
LEMD3-205ENST00000544506 FBXO15Q8NCQ5 510 aaPredicted RBP7.69□□□□□ -1.18
LEMD3-205ENST00000544506 TSPAN17Q96FV3 270 aa7.69□□□□□ -1.18
LEMD3-205ENST00000544506 PLA2G2DQ9UNK4 145 aa7.69□□□□□ -1.18
LEMD3-205ENST00000544506 TCRBV16S1A1N1A0A5B0 115 aa7.68□□□□□ -1.18
LEMD3-205ENST00000544506 WNT9AO14904 365 aa7.68□□□□□ -1.18
LEMD3-205ENST00000544506 SRGAP2CP0DJJ0 459 aa7.68□□□□□ -1.18
LEMD3-205ENST00000544506 GNAT1P11488 350 aa7.68□□□□□ -1.18
LEMD3-205ENST00000544506 SDSP20132 328 aa7.68□□□□□ -1.18
LEMD3-205ENST00000544506 EMC4Q5J8M3 183 aa7.68□□□□□ -1.18
LEMD3-205ENST00000544506 STEAP3Q658P3 488 aa7.68□□□□□ -1.18
LEMD3-205ENST00000544506 PIP4K2CQ8TBX8 421 aa7.68□□□□□ -1.18
LEMD3-205ENST00000544506 BCAS3Q9H6U6 928 aa7.68□□□□□ -1.18
LEMD3-205ENST00000544506 APPP05067 770 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 PYGMP11217 842 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 COL6A2P12110 1019 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 ZNF200P98182 395 aaPredicted RBP7.67□□□□□ -1.18
LEMD3-205ENST00000544506 MESP2Q0VG99 397 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 CHRNA2Q15822 529 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 OGFOD2Q6N063 350 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 OTOP3Q7RTS5 596 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 NINJ1Q92982 152 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 FBXW5Q969U6 566 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 SLC6A20Q9NP91 592 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 SIRT5Q9NXA8 310 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 MBD1Q9UIS9 605 aaPredicted RBP7.67□□□□□ -1.18
LEMD3-205ENST00000544506 PALD1Q9ULE6 856 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 ZNF652Q9Y2D9 606 aa7.67□□□□□ -1.18
LEMD3-205ENST00000544506 TEX51A0A1B0GUA7 166 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 HGSO14964 777 aaPredicted RBP7.66□□□□□ -1.18
LEMD3-205ENST00000544506 ZBTB7AO95365 584 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 CKMP06732 381 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 IGFALSP35858 605 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 SPIRE1Q08AE8 756 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 ZNF460Q14592 562 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 SLC9A5Q14940 896 aa7.66□□□□□ -1.18
LEMD3-205ENST00000544506 DALRD3Q5D0E6 543 aaKnown RBP7.66□□□□□ -1.18
LEMD3-205ENST00000544506 HABP4Q5JVS0 413 aaKnown RBP7.66□□□□□ -1.18
LEMD3-205ENST00000544506 NIM1KQ8IY84 436 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms