RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 EPB41L4BQ9H329 900 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 EPB41L1Q9H4G0 881 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 NSUN3Q9H649 340 aaKnown RBP3.47□□□□□ -1.85
YBX3-214ENST00000544501 SLC52A2Q9HAB3 445 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 FANCLQ9NW38 375 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 BTG4Q9NY30 223 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 CLDND1Q9NY35 253 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 FBLN5Q9UBX5 448 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 FBXL7Q9UJT9 491 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 RNF114Q9Y508 228 aa3.47□□□□□ -1.85
YBX3-214ENST00000544501 NUDT19A8MXV4 375 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 FAM47E-STBD1D6RA91 191 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 F8W031 263 aaPredicted RBP3.46□□□□□ -1.86
YBX3-214ENST00000544501 ARVCFO00192 962 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 GSTA4O15217 222 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 MAFKO60675 156 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 SEMA7AO75326 666 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 FARP2O94887 1054 aaPredicted RBP3.46□□□□□ -1.86
YBX3-214ENST00000544501 RAPGEF3O95398 923 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 NPTXRO95502 500 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 ASMTLO95671 621 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 SOD2P04179 222 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 FPR2P25090 351 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 HSD3B2P26439 372 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 GUCY1A3Q02108 690 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 SPIRE1Q08AE8 756 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 PLEKHG4Q58EX7 1191 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 EMC4Q5J8M3 183 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 CYP4F22Q6NT55 531 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 ZC3H14Q6PJT7 736 aaKnown RBP3.46□□□□□ -1.86
YBX3-214ENST00000544501 ZNF605Q86T29 641 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 MTDHQ86UE4 582 aaKnown RBP3.46□□□□□ -1.86
YBX3-214ENST00000544501 NLGN1Q8N2Q7 840 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 SLC7A14Q8TBB6 771 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 PANK1Q8TE04 598 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 TSPAN17Q96FV3 270 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 MAGEB10Q96LZ2 347 aaPredicted RBP3.46□□□□□ -1.86
YBX3-214ENST00000544501 DIRC2Q96SL1 478 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 FEZ1Q99689 392 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 INTS7Q9NVH2 962 aaKnown RBP3.46□□□□□ -1.86
YBX3-214ENST00000544501 NDOR1Q9UHB4 597 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 DBR1Q9UK59 544 aaKnown RBP3.46□□□□□ -1.86
YBX3-214ENST00000544501 PLAAQ9Y263 795 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 TRAF6Q9Y4K3 522 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 PCDHA8Q9Y5H6 950 aa3.46□□□□□ -1.86
YBX3-214ENST00000544501 MYOCOSA0A1B0GUC4 107 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 ZC3H12DA2A288 527 aaKnown RBP3.45□□□□□ -1.86
YBX3-214ENST00000544501 B4E1Z4 1266 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 KRIT1O00522 736 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 HGSO14964 777 aaPredicted RBP3.45□□□□□ -1.86
YBX3-214ENST00000544501 PPP1R12AO14974 1030 aaPredicted RBP3.45□□□□□ -1.86
YBX3-214ENST00000544501 TADA3O75528 432 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 CLSTN1O94985 981 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 CRTAMO95727 393 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 SDHBP21912 280 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 VIPR1P32241 457 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 TXKP42681 527 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 SRSF3P84103 164 aaKnown RBP3.45□□□□□ -1.86
YBX3-214ENST00000544501 PRR5P85299 388 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 MESP2Q0VG99 397 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 PLEKHN1Q494U1 663 aaPredicted RBP3.45□□□□□ -1.86
YBX3-214ENST00000544501 TAF7LQ5H9L4 462 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 HABP4Q5JVS0 413 aaKnown RBP3.45□□□□□ -1.86
YBX3-214ENST00000544501 SDE2Q6IQ49 451 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 OTOP3Q7RTS5 596 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 KIAA0907Q7Z7F0 614 aaPredicted RBP3.45□□□□□ -1.86
YBX3-214ENST00000544501 POU5F2Q8N7G0 328 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 PCDH19Q8TAB3 1148 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.45□□□□□ -1.86
YBX3-214ENST00000544501 SCLYQ96I15 445 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 FAM84AQ96KN4 292 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 PPP1R16BQ96T49 567 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 PDGFDQ9GZP0 370 aaPredicted RBP3.45□□□□□ -1.86
YBX3-214ENST00000544501 TRIM39Q9HCM9 518 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 SLC6A20Q9NP91 592 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 SIRT5Q9NXA8 310 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 ZNF652Q9Y2D9 606 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 NUB1Q9Y5A7 615 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 PCDHA9Q9Y5H5 950 aa3.45□□□□□ -1.86
YBX3-214ENST00000544501 IRS2Q9Y4H2 1338 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 TCRBV16S1A1N1A0A5B0 115 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 SGSM2O43147 1006 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 ASLP04424 464 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 GNAT1P11488 350 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 GLDCP23378 1020 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 PABPC4Q13310 644 aaKnown RBP eCLIP3.44□□□□□ -1.86
YBX3-214ENST00000544501 TARBP2Q15633 366 aaKnown RBP3.44□□□□□ -1.86
YBX3-214ENST00000544501 FAM47CQ5HY64 1035 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 STEAP3Q658P3 488 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 TMEM132EQ6IEE7 984 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 OGFOD2Q6N063 350 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 C16orf59Q7L2K0 433 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 TMC6Q7Z403 805 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 BRAPQ7Z569 592 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 TRIM48Q8IWZ4 208 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 PHOSPHO1Q8TCT1 267 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 CPA5Q8WXQ8 436 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 KCNN1Q92952 543 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 NINJ1Q92982 152 aa3.44□□□□□ -1.86
YBX3-214ENST00000544501 FBXW5Q969U6 566 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms