RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 TOMM22Q9NS69 142 aa18.19■□□□□ 0.5
CD4-212ENST00000544344 GTF2IRD1Q9UHL9 959 aa18.19■□□□□ 0.5
CD4-212ENST00000544344 MTUS1Q9ULD2 1270 aa18.19■□□□□ 0.5
CD4-212ENST00000544344 PCDHB15Q9Y5E8 787 aa18.19■□□□□ 0.5
CD4-212ENST00000544344 ABHD14A-ACY1A0A1B0GW23 586 aa18.18■□□□□ 0.5
CD4-212ENST00000544344 GH1P01241 217 aa18.18■□□□□ 0.5
CD4-212ENST00000544344 MBTPS1Q14703 1052 aa18.18■□□□□ 0.5
CD4-212ENST00000544344 TRIM71Q2Q1W2 868 aaKnown RBP18.18■□□□□ 0.5
CD4-212ENST00000544344 USH1GQ495M9 461 aa18.18■□□□□ 0.5
CD4-212ENST00000544344 FAM178BQ8IXR5 827 aa18.18■□□□□ 0.5
CD4-212ENST00000544344 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.18■□□□□ 0.5
CD4-212ENST00000544344 TTC14Q96N46 770 aa18.18■□□□□ 0.5
CD4-212ENST00000544344 TAAR1Q96RJ0 339 aa18.18■□□□□ 0.5
CD4-212ENST00000544344 TGS1Q96RS0 853 aaKnown RBP18.18■□□□□ 0.5
CD4-212ENST00000544344 HDAC6Q9UBN7 1215 aa18.18■□□□□ 0.5
CD4-212ENST00000544344 B4DLN1 442 aa18.17■□□□□ 0.5
CD4-212ENST00000544344 PARNO95453 639 aaKnown RBP18.17■□□□□ 0.5
CD4-212ENST00000544344 MRPL12P52815 198 aaKnown RBP18.17■□□□□ 0.5
CD4-212ENST00000544344 MKRN4PQ13434 485 aaPredicted RBP18.17■□□□□ 0.5
CD4-212ENST00000544344 LEXMQ3ZCV2 418 aa18.17■□□□□ 0.5
CD4-212ENST00000544344 SEPT14Q6ZU15 432 aa18.17■□□□□ 0.5
CD4-212ENST00000544344 SYTL5Q8TDW5 730 aaPredicted RBP18.17■□□□□ 0.5
CD4-212ENST00000544344 HELLSQ9NRZ9 838 aa18.17■□□□□ 0.5
CD4-212ENST00000544344 A0A0D9SFI3 127 aa18.16■□□□□ 0.5
CD4-212ENST00000544344 HAS3O00219 553 aa18.16■□□□□ 0.5
CD4-212ENST00000544344 GOLGA8HP0CJ92 632 aa18.16■□□□□ 0.5
CD4-212ENST00000544344 CASTP20810 708 aaKnown RBP18.16■□□□□ 0.5
CD4-212ENST00000544344 HIC1Q14526 733 aa18.16■□□□□ 0.5
CD4-212ENST00000544344 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
CD4-212ENST00000544344 FAM227BQ96M60 508 aa18.16■□□□□ 0.5
CD4-212ENST00000544344 DDX41Q9UJV9 622 aaKnown RBP18.16■□□□□ 0.5
CD4-212ENST00000544344 ZMYM6O95789 1325 aa18.16■□□□□ 0.5
CD4-212ENST00000544344 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 F2P00734 622 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
CD4-212ENST00000544344 IL9P15248 144 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 PSEN2P49810 448 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 HAND2P61296 217 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 ZNF618Q5T7W0 954 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.15■□□□□ 0.5
CD4-212ENST00000544344 GJD3Q8N144 294 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 NSUN6Q8TEA1 469 aaKnown RBP18.15■□□□□ 0.5
CD4-212ENST00000544344 EMID1Q96A84 441 aaPredicted RBP18.15■□□□□ 0.5
CD4-212ENST00000544344 EVI5LQ96CN4 794 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 C17orf80Q9BSJ5 609 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 UBA5Q9GZZ9 404 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 MAF1Q9H063 256 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 MYH7BA7E2Y1 1941 aa18.15■□□□□ 0.5
CD4-212ENST00000544344 PRR33A8MZF0 331 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 KCNA5P22460 613 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 ZNF200P98182 395 aaPredicted RBP18.14■□□□□ 0.49
CD4-212ENST00000544344 PTK7Q13308 1070 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 IKBKEQ14164 716 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 CDC37Q16543 378 aaPredicted RBP18.14■□□□□ 0.49
CD4-212ENST00000544344 DGKDQ16760 1214 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 GPATCH4Q5T3I0 446 aaKnown RBP18.14■□□□□ 0.49
CD4-212ENST00000544344 FAM117BQ6P1L5 589 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
CD4-212ENST00000544344 TBC1D10CQ8IV04 446 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 C7orf31Q8N865 590 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 IWS1Q96ST2 819 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 ALG1Q9BT22 464 aa18.14■□□□□ 0.49
CD4-212ENST00000544344 EFCAB14O75071 495 aa18.13■□□□□ 0.49
CD4-212ENST00000544344 ZNF286BP0CG31 522 aa18.13■□□□□ 0.49
CD4-212ENST00000544344 HOXD8P13378 290 aaPredicted RBP18.13■□□□□ 0.49
CD4-212ENST00000544344 HTRA4P83105 476 aaPredicted RBP18.13■□□□□ 0.49
CD4-212ENST00000544344 MFSD10Q14728 455 aa18.13■□□□□ 0.49
CD4-212ENST00000544344 STXBP2Q15833 593 aa18.13■□□□□ 0.49
CD4-212ENST00000544344 KIAA0753Q2KHM9 967 aa18.13■□□□□ 0.49
CD4-212ENST00000544344 MCMDC2Q4G0Z9 681 aa18.13■□□□□ 0.49
CD4-212ENST00000544344 SP7Q8TDD2 431 aaPredicted RBP18.13■□□□□ 0.49
CD4-212ENST00000544344 RMDN3Q96TC7 470 aa18.13■□□□□ 0.49
CD4-212ENST00000544344 ABCB11O95342 1321 aa18.13■□□□□ 0.49
CD4-212ENST00000544344 MYH6P13533 1939 aa18.13■□□□□ 0.49
CD4-212ENST00000544344 GRXCR2A6NFK2 248 aa18.12■□□□□ 0.49
CD4-212ENST00000544344 LGR5O75473 907 aa18.12■□□□□ 0.49
CD4-212ENST00000544344 PPTC7Q8NI37 304 aa18.12■□□□□ 0.49
CD4-212ENST00000544344 NEK9Q8TD19 979 aa18.12■□□□□ 0.49
CD4-212ENST00000544344 ZKSCAN3Q9BRR0 538 aa18.12■□□□□ 0.49
CD4-212ENST00000544344 INSL6Q9Y581 213 aa18.12■□□□□ 0.49
CD4-212ENST00000544344 NEDD4P46934 1319 aa18.12■□□□□ 0.49
CD4-212ENST00000544344 RGS20O76081 388 aa18.11■□□□□ 0.49
CD4-212ENST00000544344 PCP11498 1178 aaKnown RBP18.11■□□□□ 0.49
CD4-212ENST00000544344 PTCRAQ6ISU1 281 aaPredicted RBP18.11■□□□□ 0.49
CD4-212ENST00000544344 MFSD6Q6ZSS7 791 aa18.11■□□□□ 0.49
CD4-212ENST00000544344 DGKHQ86XP1 1220 aa18.11■□□□□ 0.49
CD4-212ENST00000544344 ADGRF4Q8IZF3 695 aa18.11■□□□□ 0.49
CD4-212ENST00000544344 FBXO22Q8NEZ5 403 aa18.11■□□□□ 0.49
CD4-212ENST00000544344 DBF4BQ8NFT6 615 aa18.11■□□□□ 0.49
CD4-212ENST00000544344 MRPL38Q96DV4 380 aaKnown RBP18.11■□□□□ 0.49
CD4-212ENST00000544344 KATNAL1Q9BW62 490 aa18.11■□□□□ 0.49
CD4-212ENST00000544344 OPLAHO14841 1288 aa18.1■□□□□ 0.49
CD4-212ENST00000544344 EIF3JO75822 258 aaKnown RBP18.1■□□□□ 0.49
CD4-212ENST00000544344 NR3C2P08235 984 aa18.1■□□□□ 0.49
CD4-212ENST00000544344 EIF2AK2P19525 551 aaKnown RBP18.1■□□□□ 0.49
CD4-212ENST00000544344 NMIQ13287 307 aaPredicted RBP18.1■□□□□ 0.49
CD4-212ENST00000544344 LAMC2Q13753 1193 aa18.1■□□□□ 0.49
CD4-212ENST00000544344 QRICH1Q2TAL8 776 aa18.1■□□□□ 0.49
CD4-212ENST00000544344 ALYREFQ86V81 257 aaKnown RBP18.1■□□□□ 0.49
CD4-212ENST00000544344 PXMP2Q9NR77 195 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms