RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 MRVI1Q9Y6F6 885 aa26.82■■□□□ 1.88
CHFR-222ENST00000544093 LAMA3Q16787 3333 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 KLF18A0A0U1RQI7 1052 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 CCDC196A0A1B0GTZ2 297 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 ARIH2O95376 493 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 TGFB3P10600 412 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 MYCLP12524 364 aaPredicted RBP26.81■■□□□ 1.88
CHFR-222ENST00000544093 PURAQ00577 322 aaKnown RBP26.81■■□□□ 1.88
CHFR-222ENST00000544093 RAB11FIP4Q86YS3 637 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 CMTR1Q8N1G2 835 aaKnown RBP26.81■■□□□ 1.88
CHFR-222ENST00000544093 SMARCC2Q8TAQ2 1214 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 EMID1Q96A84 441 aaPredicted RBP26.81■■□□□ 1.88
CHFR-222ENST00000544093 TBX21Q9UL17 535 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 BRPF3Q9ULD4 1205 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 FRMPD4Q14CM0 1322 aa26.81■■□□□ 1.88
CHFR-222ENST00000544093 DDX41Q9UJV9 622 aaKnown RBP26.8■■□□□ 1.88
CHFR-222ENST00000544093 SCN10AQ9Y5Y9 1956 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 GOLGA8AA7E2F4 631 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 GOLGA8BA8MQT2 603 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 hCG_1984214I3L0E3 225 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 TIMP1P01033 207 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 MYL3P08590 195 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 LY6KQ17RY6 165 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 XRRA1Q6P2D8 792 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 CCDC82Q8N4S0 544 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 ZNF713Q8N859 430 aaPredicted RBP26.79■■□□□ 1.88
CHFR-222ENST00000544093 COPS5Q92905 334 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 PSTPIP2Q9H939 334 aa26.79■■□□□ 1.88
CHFR-222ENST00000544093 EIF5BO60841 1220 aaKnown RBP26.78■■□□□ 1.88
CHFR-222ENST00000544093 CD4P01730 458 aa26.78■■□□□ 1.88
CHFR-222ENST00000544093 RPS6KB1P23443 525 aa26.78■■□□□ 1.88
CHFR-222ENST00000544093 ARHGAP1Q07960 439 aa26.78■■□□□ 1.88
CHFR-222ENST00000544093 LAMC2Q13753 1193 aa26.78■■□□□ 1.88
CHFR-222ENST00000544093 GNPTABQ3T906 1256 aa26.78■■□□□ 1.88
CHFR-222ENST00000544093 Q6ZUG5 572 aa26.78■■□□□ 1.88
CHFR-222ENST00000544093 GRIN2DO15399 1336 aa26.77■■□□□ 1.88
CHFR-222ENST00000544093 CNTNAP5Q8WYK1 1306 aa26.77■■□□□ 1.88
CHFR-222ENST00000544093 MEIS2O14770 477 aa26.77■■□□□ 1.88
CHFR-222ENST00000544093 CASTP20810 708 aaKnown RBP26.77■■□□□ 1.88
CHFR-222ENST00000544093 GPR153Q6NV75 609 aa26.77■■□□□ 1.88
CHFR-222ENST00000544093 MMP3P08254 477 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 SUPT20HL2P0C7V6 817 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 METAP2P50579 478 aaKnown RBP eCLIP26.76■■□□□ 1.87
CHFR-222ENST00000544093 FPGSQ05932 587 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 PTPN11Q06124 597 aaPredicted RBP26.76■■□□□ 1.87
CHFR-222ENST00000544093 PPP1R18Q6NYC8 613 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 NFRKBQ6P4R8 1299 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 HEATR3Q7Z4Q2 680 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 AFG1LQ8WV93 481 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 BRF1Q92994 677 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 USP26Q9BXU7 913 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 AGXT2Q9BYV1 514 aa26.76■■□□□ 1.87
CHFR-222ENST00000544093 NAP1L2Q9ULW6 460 aaPredicted RBP26.76■■□□□ 1.87
CHFR-222ENST00000544093 MYH7BA7E2Y1 1941 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 NID2Q14112 1375 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 RGS20O76081 388 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 ITGB8P26012 769 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 PSMC6P62333 389 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 DGKDQ16760 1214 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 PCNX4Q63HM2 1172 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 MFSD5Q6N075 450 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 USP17L6PQ6QN14 398 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 DHX37Q8IY37 1157 aaKnown RBP26.75■■□□□ 1.87
CHFR-222ENST00000544093 IL31RAQ8NI17 732 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 PPTC7Q8NI37 304 aa26.75■■□□□ 1.87
CHFR-222ENST00000544093 ALDH8A1Q9H2A2 487 aaPredicted RBP26.75■■□□□ 1.87
CHFR-222ENST00000544093 CPA1P15085 419 aa26.74■■□□□ 1.87
CHFR-222ENST00000544093 FUT2Q10981 343 aa26.74■■□□□ 1.87
CHFR-222ENST00000544093 TMEM199Q8N511 208 aa26.74■■□□□ 1.87
CHFR-222ENST00000544093 INPP4AQ96PE3 977 aaPredicted RBP26.74■■□□□ 1.87
CHFR-222ENST00000544093 TM6SF1Q9BZW5 370 aa26.74■■□□□ 1.87
CHFR-222ENST00000544093 GLT8D2Q9H1C3 349 aa26.74■■□□□ 1.87
CHFR-222ENST00000544093 PCDH10Q9P2E7 1040 aa26.74■■□□□ 1.87
CHFR-222ENST00000544093 hCG_1642624A0A1W2PR95 340 aa26.73■■□□□ 1.87
CHFR-222ENST00000544093 SPDYE3A6NKU9 549 aa26.73■■□□□ 1.87
CHFR-222ENST00000544093 APOBRQ0VD83 1088 aa26.73■■□□□ 1.87
CHFR-222ENST00000544093 RUFY3Q7L099 469 aa26.73■■□□□ 1.87
CHFR-222ENST00000544093 KATNAL1Q9BW62 490 aa26.73■■□□□ 1.87
CHFR-222ENST00000544093 EHMT1Q9H9B1 1298 aa26.73■■□□□ 1.87
CHFR-222ENST00000544093 ZSWIM6Q9HCJ5 1215 aa26.73■■□□□ 1.87
CHFR-222ENST00000544093 CYP46A1Q9Y6A2 500 aa26.73■■□□□ 1.87
CHFR-222ENST00000544093 V9GY48 417 aaPredicted RBP26.73■■□□□ 1.87
CHFR-222ENST00000544093 B4GALT4O60513 344 aa26.72■■□□□ 1.87
CHFR-222ENST00000544093 ICAM3P32942 547 aa26.72■■□□□ 1.87
CHFR-222ENST00000544093 PPIGQ13427 754 aaKnown RBP eCLIP26.72■■□□□ 1.873e-6■■■□□ 16.2
CHFR-222ENST00000544093 CELF3Q5SZQ8 465 aaKnown RBP26.72■■□□□ 1.87
CHFR-222ENST00000544093 MYSM1Q5VVJ2 828 aa26.72■■□□□ 1.87
CHFR-222ENST00000544093 FAM217BQ9NTX9 383 aaPredicted RBP26.72■■□□□ 1.87
CHFR-222ENST00000544093 SZT2Q5T011 3432 aa26.72■■□□□ 1.87
CHFR-222ENST00000544093 FIBPO43427 364 aa26.71■■□□□ 1.87
CHFR-222ENST00000544093 UBA1P22314 1058 aaKnown RBP26.71■■□□□ 1.87
CHFR-222ENST00000544093 CDC27P30260 824 aa26.71■■□□□ 1.87
CHFR-222ENST00000544093 NAPAP54920 295 aa26.71■■□□□ 1.87
CHFR-222ENST00000544093 EVCP57679 992 aa26.71■■□□□ 1.87
CHFR-222ENST00000544093 MRPS9P82933 396 aaKnown RBP26.71■■□□□ 1.87
CHFR-222ENST00000544093 NBPF20Q3BBV1 942 aa26.71■■□□□ 1.87
CHFR-222ENST00000544093 WWC2Q6AWC2 1192 aa26.71■■□□□ 1.87
CHFR-222ENST00000544093 NLRX1Q86UT6 975 aa26.71■■□□□ 1.87
CHFR-222ENST00000544093 GPKOWQ92917 476 aaPredicted RBP eCLIP26.71■■□□□ 1.87
CHFR-222ENST00000544093 TRPV6Q9H1D0 765 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms