RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 RGS20O76081 388 aa25.04■■□□□ 1.6
OTUB1-212ENST00000543988 NEK4P51957 841 aa25.04■■□□□ 1.6
OTUB1-212ENST00000543988 ANKRD1Q15327 319 aa25.04■■□□□ 1.6
OTUB1-212ENST00000543988 PCSK9Q8NBP7 692 aaKnown RBP25.04■■□□□ 1.6
OTUB1-212ENST00000543988 COPS5Q92905 334 aa25.04■■□□□ 1.6
OTUB1-212ENST00000543988 ZFP91Q96JP5 570 aaPredicted RBP25.04■■□□□ 1.6
OTUB1-212ENST00000543988 RNF26Q9BY78 433 aaPredicted RBP25.04■■□□□ 1.6
OTUB1-212ENST00000543988 RIC8AQ9NPQ8 531 aa25.04■■□□□ 1.6
OTUB1-212ENST00000543988 ASGR1P07306 291 aa25.03■■□□□ 1.6
OTUB1-212ENST00000543988 ADCY7P51828 1080 aa25.03■■□□□ 1.6
OTUB1-212ENST00000543988 AKAP17AQ02040 695 aaKnown RBP25.03■■□□□ 1.6
OTUB1-212ENST00000543988 OR6J1Q8NGC5 347 aa25.03■■□□□ 1.6
OTUB1-212ENST00000543988 NR2E3Q9Y5X4 410 aa25.03■■□□□ 1.6
OTUB1-212ENST00000543988 ALPK3Q96L96 1907 aa25.02■■□□□ 1.6
OTUB1-212ENST00000543988 CPLX1O14810 134 aa25.02■■□□□ 1.6
OTUB1-212ENST00000543988 NKRFO15226 690 aaKnown RBP eCLIP25.02■■□□□ 1.6
OTUB1-212ENST00000543988 PFKFB2O60825 505 aa25.02■■□□□ 1.6
OTUB1-212ENST00000543988 RTP1P59025 263 aa25.02■■□□□ 1.6
OTUB1-212ENST00000543988 MRPS9P82933 396 aaKnown RBP25.02■■□□□ 1.6
OTUB1-212ENST00000543988 SCRN1Q12765 414 aa25.02■■□□□ 1.6
OTUB1-212ENST00000543988 SNX17Q15036 470 aa25.02■■□□□ 1.6
OTUB1-212ENST00000543988 SLC39A5Q6ZMH5 540 aa25.02■■□□□ 1.6
OTUB1-212ENST00000543988 C22orf23Q9BZE7 217 aa25.02■■□□□ 1.6
OTUB1-212ENST00000543988 MRVI1Q9Y6F6 885 aa25.02■■□□□ 1.6
OTUB1-212ENST00000543988 SMCO2A6NFE2 343 aa25.01■■□□□ 1.59
OTUB1-212ENST00000543988 LY6KQ17RY6 165 aa25.01■■□□□ 1.59
OTUB1-212ENST00000543988 KIF2CQ99661 725 aa25.01■■□□□ 1.59
OTUB1-212ENST00000543988 SLKQ9H2G2 1235 aaPredicted RBP25.01■■□□□ 1.59
OTUB1-212ENST00000543988 SPDYE3A6NKU9 549 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 LARGE1O95461 756 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 ARHGAP1Q07960 439 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 TRIM60Q495X7 471 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 PCNX4Q63HM2 1172 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 CXCL17Q6UXB2 119 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 TRIM22Q8IYM9 498 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 STARD7Q9NQZ5 370 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 DDX41Q9UJV9 622 aaKnown RBP25■■□□□ 1.59
OTUB1-212ENST00000543988 PCDHA6Q9UN73 950 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 ATP11BQ9Y2G3 1177 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 PCDHA8Q9Y5H6 950 aa25■■□□□ 1.59
OTUB1-212ENST00000543988 ESYT2A0FGR8 921 aa24.99■■□□□ 1.59
OTUB1-212ENST00000543988 RBM25P49756 843 aaKnown RBP24.99■■□□□ 1.59
OTUB1-212ENST00000543988 SSRP1Q08945 709 aaKnown RBP24.99■■□□□ 1.59
OTUB1-212ENST00000543988 CPLX2Q6PUV4 134 aaKnown RBP24.99■■□□□ 1.59
OTUB1-212ENST00000543988 TEX2Q8IWB9 1127 aa24.99■■□□□ 1.59
OTUB1-212ENST00000543988 GLT1D1Q96MS3 346 aa24.99■■□□□ 1.59
OTUB1-212ENST00000543988 INPP4AQ96PE3 977 aaPredicted RBP24.99■■□□□ 1.59
OTUB1-212ENST00000543988 ZMYND8Q9ULU4 1186 aaPredicted RBP24.99■■□□□ 1.59
OTUB1-212ENST00000543988 GH1P01241 217 aa24.98■■□□□ 1.59
OTUB1-212ENST00000543988 CPT1AP50416 773 aa24.98■■□□□ 1.59
OTUB1-212ENST00000543988 C1orf53Q5VUE5 145 aa24.98■■□□□ 1.59
OTUB1-212ENST00000543988 XRRA1Q6P2D8 792 aa24.98■■□□□ 1.59
OTUB1-212ENST00000543988 CCDC12Q8WUD4 166 aaPredicted RBP24.98■■□□□ 1.59
OTUB1-212ENST00000543988 PGBD1Q96JS3 809 aa24.98■■□□□ 1.59
OTUB1-212ENST00000543988 GLT8D2Q9H1C3 349 aa24.98■■□□□ 1.59
OTUB1-212ENST00000543988 TMEM260Q9NX78 707 aa24.98■■□□□ 1.59
OTUB1-212ENST00000543988 VPS54Q9P1Q0 977 aa24.98■■□□□ 1.59
OTUB1-212ENST00000543988 ELP1O95163 1332 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 A6NJR5 290 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 ADAMTS3O15072 1205 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 ZEB2O60315 1214 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 STAM2O75886 525 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 ME3Q16798 604 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 NECAB1Q8N987 351 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 ZMYND12Q9H0C1 365 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 RTEL1Q9NZ71 1219 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 PCDH10Q9P2E7 1040 aa24.97■■□□□ 1.59
OTUB1-212ENST00000543988 DNAH12Q6ZR08 3092 aa24.96■■□□□ 1.59
OTUB1-212ENST00000543988 DTNBO60941 627 aa24.96■■□□□ 1.59
OTUB1-212ENST00000543988 CDKL5O76039 1030 aa24.96■■□□□ 1.59
OTUB1-212ENST00000543988 DEXIO95424 95 aa24.96■■□□□ 1.59
OTUB1-212ENST00000543988 UBA1P22314 1058 aaKnown RBP24.96■■□□□ 1.59
OTUB1-212ENST00000543988 CLK2P49760 499 aaKnown RBP24.96■■□□□ 1.59
OTUB1-212ENST00000543988 SEMA3FQ13275 785 aa24.96■■□□□ 1.59
OTUB1-212ENST00000543988 GNPTABQ3T906 1256 aa24.96■■□□□ 1.59
OTUB1-212ENST00000543988 AFG1LQ8WV93 481 aa24.96■■□□□ 1.59
OTUB1-212ENST00000543988 VTI1AQ96AJ9 217 aa24.96■■□□□ 1.59
OTUB1-212ENST00000543988 ANO3Q9BYT9 981 aa24.96■■□□□ 1.59
OTUB1-212ENST00000543988 CTDNEP1O95476 244 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 FOSP01100 380 aaPredicted RBP24.95■■□□□ 1.58
OTUB1-212ENST00000543988 MYL3P08590 195 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 SYN1P17600 705 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 TLE2Q04725 743 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 AP3B2Q13367 1082 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 KCNV1Q6PIU1 500 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 CCDC148Q8NFR7 591 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 GTF3C6Q969F1 213 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 EMID1Q96A84 441 aaPredicted RBP24.95■■□□□ 1.58
OTUB1-212ENST00000543988 AIFM3Q96NN9 605 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 EHMT1Q9H9B1 1298 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 UPF2Q9HAU5 1272 aaKnown RBP24.95■■□□□ 1.58
OTUB1-212ENST00000543988 C6orf50Q9HD87 102 aa24.95■■□□□ 1.58
OTUB1-212ENST00000543988 A0A0U1RQG5 324 aaPredicted RBP24.94■■□□□ 1.58
OTUB1-212ENST00000543988 SPATA31C2B4DYI2 1134 aa24.94■■□□□ 1.58
OTUB1-212ENST00000543988 FIBPO43427 364 aa24.94■■□□□ 1.58
OTUB1-212ENST00000543988 SORBS3O60504 671 aa24.94■■□□□ 1.58
OTUB1-212ENST00000543988 PQBP1O60828 265 aaKnown RBP24.94■■□□□ 1.58
OTUB1-212ENST00000543988 CABYRO75952 493 aa24.94■■□□□ 1.58
OTUB1-212ENST00000543988 ICAM3P32942 547 aa24.94■■□□□ 1.58
OTUB1-212ENST00000543988 PURAQ00577 322 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms