RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 SAPCD2Q86UD0 394 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 ZNF589Q86UQ0 364 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-217ENST00000543205 ALDH16A1Q8IZ83 802 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 IFNL3Q8IZI9 196 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 COL26A1Q96A83 441 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 GAS2L1Q99501 681 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-217ENST00000543205 NAPBQ9H115 298 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 ARPP21Q9UBL0 812 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-217ENST00000543205 HERC5Q9UII4 1024 aaKnown RBP6.01□□□□□ -1.45
CLIP1-217ENST00000543205 FZD1Q9UP38 647 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 RAD50Q92878 1312 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 MYH7P12883 1935 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 MINDY4BA8MYZ0 360 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 HMGB1P1B2RPK0 211 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-217ENST00000543205 FOXN1O15353 648 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 IGHA1P01876 353 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 CYP2D6P10635 497 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 HSPD1P10809 573 aaKnown RBP6.01□□□□□ -1.45
CLIP1-217ENST00000543205 ATF4P18848 351 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-217ENST00000543205 PLCD1P51178 756 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 GYS2P54840 703 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 PTSQ03393 145 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 MAP3K11Q16584 847 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 DEFB115Q30KQ5 88 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 XP32Q5T750 250 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 KIAA1211Q6ZU35 1233 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 IL17RAQ96F46 866 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 SLC39A13Q96H72 371 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 WRNIP1Q96S55 665 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 EHD4Q9H223 541 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 GPAMQ9HCL2 828 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 ZDHHC3Q9NYG2 299 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 SERPINB13Q9UIV8 391 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 CSADQ9Y600 493 aa6.01□□□□□ -1.45
CLIP1-217ENST00000543205 SSC5DA1L4H1 1573 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 CYP2D7A0A087X1C5 515 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 H3BM21 787 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 SGSM2O43147 1006 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 SLC3A2P08195 630 aaKnown RBP6□□□□□ -1.45
CLIP1-217ENST00000543205 BDNFP23560 247 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 MSX1P28360 303 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 CTCFP49711 727 aaPredicted RBP6□□□□□ -1.45
CLIP1-217ENST00000543205 ZNF157P51786 506 aaPredicted RBP6□□□□□ -1.45
CLIP1-217ENST00000543205 MAP3K10Q02779 954 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 SBK1Q52WX2 424 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 C12orf60Q5U649 245 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 VPS53Q5VIR6 699 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 RGMBQ6NW40 437 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 HHIPL1Q96JK4 782 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 EPB41L4AQ9HCS5 686 aaPredicted RBP6□□□□□ -1.45
CLIP1-217ENST00000543205 DYRK1BQ9Y463 629 aa6□□□□□ -1.45
CLIP1-217ENST00000543205 RASSF10A6NK89 507 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 PHF20L1A8MW92 1017 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 RNF225M0QZC1 329 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-217ENST00000543205 GPR182O15218 404 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 CTNND1O60716 968 aaKnown RBP5.99□□□□□ -1.45
CLIP1-217ENST00000543205 FGAP02671 866 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 SLURP2P0DP57 97 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 INPP5BP32019 993 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ECE1P42892 770 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 MLLT1Q03111 559 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-217ENST00000543205 PPARAQ07869 468 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 GRM1Q13255 1194 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ALX1Q15699 326 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 C16orf46Q6P387 395 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 STK11IPQ8N1F8 1099 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ZKSCAN4Q969J2 545 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-217ENST00000543205 DYNLL2Q96FJ2 89 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ABHD8Q96I13 439 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 DSCC1Q9BVC3 393 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ELP3Q9H9T3 547 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ZNF287Q9HBT7 754 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 PICK1Q9NRD5 415 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 SWAP70Q9UH65 585 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 CTNNA3Q9UI47 895 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ZNF112Q9UJU3 913 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 AK9Q5TCS8 1911 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 PAPPA2Q9BXP8 1791 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 TRPM7Q96QT4 1865 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 FOXP2O15409 715 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ATP4AP20648 1035 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 CAP2P40123 477 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 CDK8P49336 464 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 PDE4BQ07343 736 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 VGLL4Q14135 290 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 RTN1Q16799 776 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 CERKLQ49MI3 558 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ARSJQ5FYB0 599 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-217ENST00000543205 C1orf53Q5VUE5 145 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-217ENST00000543205 C16orf86Q6ZW13 317 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 FERMT3Q86UX7 667 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 SCYL3Q8IZE3 742 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ZNF654Q8IZM8 581 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 CLMNQ96JQ2 1002 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 C8orf48Q96LL4 319 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 IL25Q9H293 177 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 RUBCNLQ9H714 662 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms