RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ZKSCAN5Q9Y2L8 839 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 GPR55Q9Y2T6 319 aaPredicted RBP5□□□□□ -1.61
SFSWAP-211ENST00000542813 THOC2Q8NI27 1593 aaKnown RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 ARID1BQ8NFD5 2236 aaPredicted RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 FZD9O00144 591 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 RNGTTO60942 597 aaKnown RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 WDHD1O75717 1129 aaPredicted RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 LRIG2O94898 1065 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 DRD2P14416 443 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 RECQLP46063 649 aaPredicted RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 NEK3P51956 506 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 AMPD2Q01433 879 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 OCRLQ01968 901 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 KLF1Q13351 362 aaPredicted RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 FZD5Q13467 585 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 INAVAQ3KP66 663 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 GRAMD1BQ3KR37 738 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 TMEM240Q5SV17 173 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 ZFYVE27Q5T4F4 411 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 SPTY2D1Q68D10 685 aaPredicted RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 IL31Q6EBC2 164 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 CDPF1Q6NVV7 123 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 KCNT2Q6UVM3 1135 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 CBLL1Q75N03 491 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 ARMCX6Q7L4S7 300 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 HDGFL2Q7Z4V5 671 aaPredicted RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 ZAR1Q86SH2 424 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 C11orf74Q86VG3 221 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 IFNL3Q8IZI9 196 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 CPA6Q8N4T0 437 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 IGSF22Q8N9C0 903 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 MFSD2AQ8NA29 543 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 C2CD4AQ8NCU7 369 aaPredicted RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 PJA1Q8NG27 643 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 DNAJB8Q8NHS0 232 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 PPM1EQ8WY54 764 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 EZH1Q92800 747 aaPredicted RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 VWCEQ96DN2 955 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 CLIP3Q96DZ5 547 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 AHCYL2Q96HN2 611 aaKnown RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 TBC1D32Q96NH3 1257 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 PIDD1Q9HB75 910 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 CABP5Q9NP86 173 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 TERF2IPQ9NYB0 399 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 RCAN3Q9UKA8 241 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 PNMA2Q9UL42 364 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 ZBTB21Q9ULJ3 1066 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 CEP131Q9UPN4 1083 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 GIT1Q9Y2X7 761 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 PCDHA8Q9Y5H6 950 aa4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 ZCCHC6Q5VYS8 1495 aaKnown RBP4.99□□□□□ -1.61
SFSWAP-211ENST00000542813 ERC2O15083 957 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 CYP26A1O43174 497 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 NRDCO43847 1150 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 ADH5P11766 374 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 CYP2C19P33261 490 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 SOX4Q06945 474 aaPredicted RBP4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 SCRN1Q12765 414 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 GBX1Q14549 363 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 PCBP2Q15366 365 aaKnown RBP eCLIP4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 DENND5AQ6IQ26 1287 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 PNMA8AQ86V59 439 aaPredicted RBP4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 ZC3H7AQ8IWR0 971 aaKnown RBP4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 TP53INP2Q8IXH6 220 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 PPIL6Q8IXY8 311 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 SHISA5Q8N114 240 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 SCYL1Q96KG9 808 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 ZDHHC15Q96MV8 337 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 ZFYVE21Q9BQ24 234 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 PHF20Q9BVI0 1012 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 ASPNQ9BXN1 380 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 SSU72Q9NP77 194 aaKnown RBP4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 VTA1Q9NP79 307 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 SPTLC3Q9NUV7 552 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 THG1LQ9NWX6 298 aaKnown RBP4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 PRR13Q9NZ81 148 aa4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 SF3B6Q9Y3B4 125 aaKnown RBP4.98□□□□□ -1.61
SFSWAP-211ENST00000542813 WASHC2AQ641Q2 1341 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 ANO9A1A5B4 782 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 ARVCFO00192 962 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 VAMP4O75379 141 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 CFBP00751 764 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 CENPBP07199 599 aaPredicted RBP4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 PHKG2P15735 406 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 ITIH2P19823 946 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 LPOP22079 712 aaPredicted RBP4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 ADMP35318 185 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 KPNA1P52294 538 aaPredicted RBP4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 SESN3P58005 492 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 GPR85P60893 370 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 CYP4F3Q08477 520 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 GTF2H3Q13889 308 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 RAPGEF1Q13905 1077 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 GRM3Q14832 879 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 DPY19L1Q2PZI1 675 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 ACBD5Q5T8D3 534 aaPredicted RBP4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 NFXL1Q6ZNB6 911 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 EPM2AIP1Q7L775 607 aaPredicted RBP4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 CHST14Q8NCH0 376 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms