RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 FOSL1P15407 271 aa12.26□□□□□ -0.45
CDH3-203ENST00000542274 TYRO3Q06418 890 aa12.26□□□□□ -0.45
CDH3-203ENST00000542274 CCAR1Q8IX12 1150 aaKnown RBP12.26□□□□□ -0.45
CDH3-203ENST00000542274 SPAG5Q96R06 1193 aa12.26□□□□□ -0.45
CDH3-203ENST00000542274 AASDHPPTQ9NRN7 309 aa12.26□□□□□ -0.45
CDH3-203ENST00000542274 TIMM22Q9Y584 194 aa12.26□□□□□ -0.45
CDH3-203ENST00000542274 COMMD10Q9Y6G5 202 aa12.26□□□□□ -0.45
CDH3-203ENST00000542274 COL11A2P13942 1736 aaPredicted RBP12.26□□□□□ -0.45
CDH3-203ENST00000542274 YY1P25490 414 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 HIBADHP31937 336 aaKnown RBP12.25□□□□□ -0.45
CDH3-203ENST00000542274 GUCY1A2P33402 732 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 ME1P48163 572 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 LONRF2Q1L5Z9 754 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 PPP1R15BQ5SWA1 713 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 NCCRP1Q6ZVX7 275 aaPredicted RBP12.25□□□□□ -0.45
CDH3-203ENST00000542274 C11orf96Q7Z7L8 435 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 MPHOSPH6Q99547 160 aaKnown RBP12.25□□□□□ -0.45
CDH3-203ENST00000542274 ZWILCHQ9H900 591 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 PREBQ9HCU5 417 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 CFAP45Q9UL16 551 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 P4HA2O15460 535 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 MYBL1P10243 752 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 ZFXP17010 805 aaPredicted RBP12.25□□□□□ -0.45
CDH3-203ENST00000542274 PRDX5P30044 214 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 SLC15A2Q16348 729 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 ANO6Q4KMQ2 910 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 THOC7Q6I9Y2 204 aaKnown RBP12.25□□□□□ -0.45
CDH3-203ENST00000542274 FBXO33Q7Z6M2 555 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 MAGEC3Q8TD91 643 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 MPP4Q96JB8 637 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 SWAP70Q9UH65 585 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 RCOR1Q9UKL0 485 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 PARP3Q9Y6F1 533 aa12.25□□□□□ -0.45
CDH3-203ENST00000542274 A0A1B0GVL5 298 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 TADA3O75528 432 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 RASSF9O75901 435 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 UFL1O94874 794 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 SMTNP53814 917 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 PPP4CP60510 307 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 EMC10Q5UCC4 262 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 MFSD6Q6ZSS7 791 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 FAM228AQ86W67 206 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 VMP1Q96GC9 406 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 ALG1Q9BT22 464 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 CLSTN2Q9H4D0 955 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 RPAP3Q9H6T3 665 aaPredicted RBP12.24□□□□□ -0.45
CDH3-203ENST00000542274 PCDHA7Q9UN72 937 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 RGPD3A6NKT7 1758 aaPredicted RBP12.24□□□□□ -0.45
CDH3-203ENST00000542274 RGPD4Q7Z3J3 1758 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 ZMYM6O95789 1325 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 GOLGA8AA7E2F4 631 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 ZBTB43O43298 467 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 ZSCAN12O43309 604 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 ATP9BO43861 1147 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 CDC25CP30307 473 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 NEK2P51955 445 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 NTRK3Q16288 839 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 RIOK1Q9BRS2 568 aaKnown RBP12.24□□□□□ -0.45
CDH3-203ENST00000542274 DNAJC25Q9H1X3 360 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 FAM204AQ9H8W3 233 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 NRXN2Q9P2S2 1712 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 MAGEB6P1A0A0J9YX57 407 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 PHACTR2O75167 634 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 CCDC192P0DO97 292 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 PPARAQ07869 468 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 SNW1Q13573 536 aaKnown RBP12.24□□□□□ -0.45
CDH3-203ENST00000542274 PPP2R5BQ15173 497 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 ALX1Q15699 326 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 CCSAPQ6IQ19 270 aaPredicted RBP12.24□□□□□ -0.45
CDH3-203ENST00000542274 CCDC121Q6ZUS5 278 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 ZBTB8BQ8NAP8 495 aaPredicted RBP12.24□□□□□ -0.45
CDH3-203ENST00000542274 GIMAP1Q8WWP7 306 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 CEP295NLQ96MC4 621 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 MAK16Q9BXY0 300 aaKnown RBP12.24□□□□□ -0.45
CDH3-203ENST00000542274 STK32BQ9NY57 414 aa12.24□□□□□ -0.45
CDH3-203ENST00000542274 ZMAT5Q9UDW3 170 aaKnown RBP12.24□□□□□ -0.45
CDH3-203ENST00000542274 UTRNP46939 3433 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 XDHP47989 1333 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 IRS2Q9Y4H2 1338 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 hCG_1642624A0A1W2PR95 340 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 EFCAB8A8MWE9 144 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 MARCKSP29966 332 aaPredicted RBP12.23□□□□□ -0.45
CDH3-203ENST00000542274 OXCT1P55809 520 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 KIF23Q02241 960 aaPredicted RBP12.23□□□□□ -0.45
CDH3-203ENST00000542274 ITIH3Q06033 890 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 ACCSLQ4AC99 568 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 CCDC40Q4G0X9 1142 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 DCLK2Q8N568 766 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 FLAD1Q8NFF5 587 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 SLC26A6Q9BXS9 759 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 ZNF219Q9P2Y4 722 aaPredicted RBP12.23□□□□□ -0.45
CDH3-203ENST00000542274 SSX2IPQ9Y2D8 614 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 MSL3P1P0C860 447 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 SLC8A1P32418 973 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 ARPC4P59998 168 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 COL19A1Q14993 1142 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 FSIP1Q8NA03 581 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 PCDH18Q9HCL0 1135 aa12.23□□□□□ -0.45
CDH3-203ENST00000542274 MAP3K20Q9NYL2 800 aaKnown RBP12.23□□□□□ -0.45
CDH3-203ENST00000542274 SLC12A7Q9Y666 1083 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms