RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 SLF1Q9BQI6 1058 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 DHX36Q9H2U1 1008 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 ANKZF1Q9H8Y5 726 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 GUCY2CP25092 1073 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 MAGEA9P43362 315 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 FXR1P51114 621 aaKnown RBP eCLIP15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 ICA1Q05084 483 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 NR1I3Q14994 352 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 SPATA1Q5VX52 437 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 FBXW10Q5XX13 1052 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 RSRC2Q7L4I2 434 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 NEDD1Q8NHV4 660 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 GPKOWQ92917 476 aaPredicted RBP eCLIP15.99■□□□□ 0.158e-8■■■■■ 30.4
SFSWAP-210ENST00000541286 KAT14Q9H8E8 782 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 FBXO28Q9NVF7 368 aa15.99■□□□□ 0.15
SFSWAP-210ENST00000541286 TUBB4AP04350 444 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 MRPS25P82663 173 aaKnown RBP15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 TBX2Q13207 712 aaPredicted RBP15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 ROBO3Q96MS0 1386 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 MYH15Q9Y2K3 1946 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 FAM237AA0A1B0GTK4 181 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 MNAT1P51948 309 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 DPYDQ12882 1025 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 BEND6Q5SZJ8 279 aaPredicted RBP15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 TATDN1Q6P1N9 297 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 GSPT2Q8IYD1 628 aaKnown RBP15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 SRBD1Q8N5C6 995 aaKnown RBP15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 CDCA5Q96FF9 252 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 L3MBTL3Q96JM7 780 aaPredicted RBP15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 ZBTB21Q9ULJ3 1066 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 TFR2Q9UP52 801 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 GOLGA6L9A6NEM1 432 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 SARSP49591 514 aaKnown RBP15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 CUL4BQ13620 913 aa15.98■□□□□ 0.15
SFSWAP-210ENST00000541286 HTRA3P83110 453 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 PKN1Q16512 942 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 FAM83AQ86UY5 434 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 SLC35F6Q8N357 371 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 RABGGTAQ92696 567 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 ZNF341Q9BYN7 854 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 GUCA1BQ9UMX6 200 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 GDAQ9Y2T3 454 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 LRRIQ3A6PVS8 624 aaPredicted RBP15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 CYTH3O43739 400 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 TNNI2P48788 182 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 SPP2Q13103 211 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 HDXQ7Z353 690 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 PCMTD1Q96MG8 357 aaPredicted RBP15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 MYCBPQ99417 103 aaPredicted RBP15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 RNF26Q9BY78 433 aaPredicted RBP15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 ELP3Q9H9T3 547 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 ADGRG1Q9Y653 693 aa15.97■□□□□ 0.15
SFSWAP-210ENST00000541286 USP2O75604 605 aaPredicted RBP15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 ERCC3P19447 782 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 CAP2P40123 477 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 CT47A1Q5JQC4 288 aaPredicted RBP15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 KIFC2Q96AC6 838 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 ZHX2Q9Y6X8 837 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 A0A1B0GTH6 734 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 TRIM49BA6NDI0 452 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 CASP8Q14790 479 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 CCDC96Q2M329 555 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 NCAPH2Q6IBW4 605 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 FCHSD1Q86WN1 690 aa15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 GEMIN8Q9NWZ8 242 aaKnown RBP15.96■□□□□ 0.15
SFSWAP-210ENST00000541286 PP2D1A8MPX8 630 aa15.96■□□□□ 0.14
SFSWAP-210ENST00000541286 ENC1O14682 589 aa15.96■□□□□ 0.14
SFSWAP-210ENST00000541286 ERCC5P28715 1186 aaPredicted RBP15.96■□□□□ 0.14
SFSWAP-210ENST00000541286 KRT9P35527 623 aa15.96■□□□□ 0.14
SFSWAP-210ENST00000541286 UBXN1Q04323 297 aa15.96■□□□□ 0.14
SFSWAP-210ENST00000541286 TNFAIP1Q13829 316 aa15.96■□□□□ 0.14
SFSWAP-210ENST00000541286 NOA1Q8NC60 698 aaKnown RBP15.96■□□□□ 0.14
SFSWAP-210ENST00000541286 UIMC1Q96RL1 719 aa15.96■□□□□ 0.14
SFSWAP-210ENST00000541286 IVLP07476 585 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 VGLL4Q14135 290 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 TRIML1Q8N9V2 468 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 ANKRD20A12PQ8NF67 263 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 TRIM10Q9UDY6 481 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 MTMR2Q13614 643 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 KRT31Q15323 416 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 IQUBQ8NA54 791 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 NELFBQ8WX92 580 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 NCAPGQ9BPX3 1015 aa15.95■□□□□ 0.14
SFSWAP-210ENST00000541286 CCDC151A5D8V7 595 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 RNF225M0QZC1 329 aaPredicted RBP15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 CCT5P48643 541 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 ZNF579Q8NAF0 562 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 OTUD5Q96G74 571 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 WNK4Q96J92 1243 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 ADD3Q9UEY8 706 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 MAD2L2Q9UI95 211 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 SAMM50Q9Y512 469 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 CTAGE9A4FU28 777 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 MAP2K7O14733 419 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 MFAP3LO75121 409 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 GYPCP04921 128 aa15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 IKQ13123 557 aaPredicted RBP15.94■□□□□ 0.14
SFSWAP-210ENST00000541286 PHF20Q9BVI0 1012 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms