RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 ATG3Q9NT62 314 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 SCAF11Q99590 1463 aaKnown RBP10.86□□□□□ -0.67
TRERF1-205ENST00000541110 PSDA5PKW4 1024 aaPredicted RBP10.86□□□□□ -0.67
TRERF1-205ENST00000541110 SUPT3HB4E1H0 165 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 NPM3O75607 178 aaKnown RBP10.86□□□□□ -0.67
TRERF1-205ENST00000541110 SCARA5Q6ZMJ2 495 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 NUDT18Q6ZVK8 323 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 ANKRD44Q8N8A2 993 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 COA7Q96BR5 231 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 ZNF212Q9UDV6 495 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 PNMA3Q9UL41 463 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 CTSWP56202 376 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 HIF1AQ16665 826 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 CDO1Q16878 200 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 TMTC3Q6ZXV5 915 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 GDAP1L1Q96MZ0 367 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 FAM49AQ9H0Q0 323 aaPredicted RBP10.86□□□□□ -0.67
TRERF1-205ENST00000541110 KIF17Q9P2E2 1029 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 AFF4Q9UHB7 1163 aaKnown RBP10.86□□□□□ -0.67
TRERF1-205ENST00000541110 RIMS2Q9UQ26 1411 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 SNX2O60749 519 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 RAD17O75943 681 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 BTDP43251 543 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 PPP1R9AQ9ULJ8 1098 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 HYOU1Q9Y4L1 999 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 ZSCAN9O15535 394 aaPredicted RBP10.86□□□□□ -0.67
TRERF1-205ENST00000541110 CHEK2O96017 543 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 ADCY1Q08828 1119 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 MESDQ14696 234 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 ODR4Q5SWX8 454 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 TADA2BQ86TJ2 420 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 TAGAPQ8N103 731 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 JPH2Q9BR39 696 aaPredicted RBP10.86□□□□□ -0.67
TRERF1-205ENST00000541110 RPF1Q9H9Y2 349 aaKnown RBP10.86□□□□□ -0.67
TRERF1-205ENST00000541110 TEX14Q8IWB6 1497 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 TOM1L1O75674 476 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 PPARAQ07869 468 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 DALRD3Q5D0E6 543 aaKnown RBP10.86□□□□□ -0.67
TRERF1-205ENST00000541110 DRC3Q9H069 523 aa10.86□□□□□ -0.67
TRERF1-205ENST00000541110 GNAT1P11488 350 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 USP14P54578 494 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 OCRLQ01968 901 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 PNOCQ13519 176 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 MIGA2Q7L4E1 593 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 CALN1Q9BXU9 219 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 EIF3CLB5ME19 914 aaKnown RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 PAMP19021 973 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 NCF2P19878 526 aaPredicted RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 NAA35Q5VZE5 725 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 CCDC84Q86UT8 332 aaPredicted RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 TEX2Q8IWB9 1127 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 EIF3CQ99613 913 aaKnown RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 TRIM45Q9H8W5 580 aaPredicted RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 SELENONQ9NZV5 590 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 ZAP70P43403 619 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 POLR2FP61218 127 aaKnown RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 CCDC85BQ15834 202 aaPredicted RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 POTEDQ86YR6 584 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 TRMT44Q8IYL2 757 aaKnown RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 DNAJC6O75061 913 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 NLRP12P59046 1061 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 LRRC23Q53EV4 343 aaPredicted RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 ARMCX3Q9UH62 379 aaPredicted RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 KRT87PA6NCN2 255 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 IGSF3O75054 1194 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 SERPIND1P05546 499 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 HSPD1P10809 573 aaKnown RBP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 FLOT2Q14254 428 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 MTERF2Q49AM1 385 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 ERFEQ4G0M1 354 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 MCTP2Q6DN12 878 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 GPKOWQ92917 476 aaPredicted RBP eCLIP10.85□□□□□ -0.67
TRERF1-205ENST00000541110 TRPA1O75762 1119 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 ARIH2O95376 493 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 STAT2P52630 851 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 MFAP3P55082 362 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 KIAA1755Q5JYT7 1200 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 KRT80Q6KB66 452 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 ARMCX2Q7L311 632 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 RAD18Q9NS91 495 aa10.85□□□□□ -0.67
TRERF1-205ENST00000541110 PIP4K2CQ8TBX8 421 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 ZSCAN10Q96SZ4 725 aaPredicted RBP10.84□□□□□ -0.67
TRERF1-205ENST00000541110 RIPOR2Q9Y4F9 1068 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 FLT4P35916 1363 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 RPS8P62241 208 aaKnown RBP10.84□□□□□ -0.67
TRERF1-205ENST00000541110 TUBB2AQ13885 445 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 GCKRQ14397 625 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 SLFN13Q68D06 897 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 TMTC1Q8IUR5 882 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 EXOC4Q96A65 974 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 TBC1D32Q96NH3 1257 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 TUBB2BQ9BVA1 445 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 FSD1LQ9BXM9 530 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 CFAP69A5D8W1 941 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 E5RI56 91 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 CD58P19256 250 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 EEF1DP29692 281 aaKnown RBP10.84□□□□□ -0.67
TRERF1-205ENST00000541110 MAPK4P31152 587 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 GYG1P46976 350 aa10.84□□□□□ -0.67
TRERF1-205ENST00000541110 ATG16L1Q676U5 607 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms