RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, human

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM65-203	ENST00000540812	PTGIS	Q16647	500 aa		18.93	■□□□□ 0.62
TRIM65-203	ENST00000540812	IFIT1B	Q5T764	474 aa	Known RBP	18.93	■□□□□ 0.62
TRIM65-203	ENST00000540812	ARHGEF16	Q5VV41	709 aa		18.93	■□□□□ 0.62
TRIM65-203	ENST00000540812	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
TRIM65-203	ENST00000540812	CNNM2	Q9H8M5	875 aa		18.93	■□□□□ 0.62
TRIM65-203	ENST00000540812	PXMP2	Q9NR77	195 aa		18.93	■□□□□ 0.62
TRIM65-203	ENST00000540812	THEG	Q9P2T0	379 aa		18.93	■□□□□ 0.62
TRIM65-203	ENST00000540812	DDX41	Q9UJV9	622 aa	Known RBP	18.93	■□□□□ 0.62
TRIM65-203	ENST00000540812	TANC1	Q9C0D5	1861 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	RFXAP	O00287	272 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	ARHGEF15	O94989	841 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	CFB	P00751	764 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	CA3	P07451	260 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	NR3C2	P08235	984 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	GSPT1	P15170	499 aa	Known RBP	18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	PDE4A	P27815	886 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	SLC35G1	Q2M3R5	365 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	TMEM67	Q5HYA8	995 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	SESTD1	Q86VW0	696 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	DHX38	Q92620	1227 aa	Known RBP	18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	MTMR8	Q96EF0	704 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	CERS4	Q9HA82	394 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	MAD2L2	Q9UI95	211 aa		18.92	■□□□□ 0.62
TRIM65-203	ENST00000540812	EPOP	A6NHQ4	379 aa		18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	EIF3J	O75822	258 aa	Known RBP	18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	CAST	P20810	708 aa	Known RBP	18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	HSD17B4	P51659	736 aa		18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	GPNMB	Q14956	572 aa		18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	MICALL1	Q8N3F8	863 aa		18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	ASB2	Q96Q27	587 aa		18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	SLC9A7	Q96T83	725 aa		18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	AMN	Q9BXJ7	453 aa		18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	MYH6	P13533	1939 aa		18.91	■□□□□ 0.62
TRIM65-203	ENST00000540812	KIAA1217	Q5T5P2	1943 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	TRIP12	Q14669	1992 aa	Predicted RBP	18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	PALM3	A6NDB9	673 aa	Predicted RBP	18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	KLRF2	D3W0D1	207 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	GHRHR	Q02643	423 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	DGKD	Q16760	1214 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	CAGE1	Q8TC20	777 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	PHOSPHO2	Q8TCD6	241 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	EMID1	Q96A84	441 aa	Predicted RBP	18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	SENP2	Q9HC62	589 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	HDAC6	Q9UBN7	1215 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	MRVI1	Q9Y6F6	885 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	NCOR1	O75376	2440 aa		18.9	■□□□□ 0.62
TRIM65-203	ENST00000540812	PRRC2B	Q5JSZ5	2229 aa	Known RBP	18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	TNFRSF10A	O00220	468 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	RGS20	O76081	388 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	ZNF286B	P0CG31	522 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	HOXA13	P31271	388 aa	Predicted RBP	18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	PSEN2	P49810	448 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	MRPS5	P82675	430 aa	Known RBP	18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	TTC22	Q5TAA0	569 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	HERC6	Q8IVU3	1022 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	IL31RA	Q8NI17	732 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	AFAP1L1	Q8TED9	768 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	PDCD2L	Q9BRP1	358 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	ALG1	Q9BT22	464 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	PCDHA1	Q9Y5I3	950 aa		18.89	■□□□□ 0.61
TRIM65-203	ENST00000540812	ZBTB5	O15062	677 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	SORBS3	O60504	671 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	MYCL	P12524	364 aa	Predicted RBP	18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	PTH1R	Q03431	593 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	TAP1	Q03518	808 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	LAMC2	Q13753	1193 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	MFSD10	Q14728	455 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	TCTN1	Q2MV58	587 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	HOMER1	Q86YM7	354 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	CCDC155	Q8N6L0	562 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	PPTC7	Q8NI37	304 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	GTF2IRD1	Q9UHL9	959 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	TAF6L	Q9Y6J9	622 aa		18.88	■□□□□ 0.61
TRIM65-203	ENST00000540812	NBN	O60934	754 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	BAIAP3	O94812	1187 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	F2	P00734	622 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	CYP21A2	P08686	494 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	SELP	P16109	830 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	GRM4	Q14833	912 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	KIAA0753	Q2KHM9	967 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	KRT40	Q6A162	431 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	STOX1	Q6ZVD7	989 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	LRRC8D	Q7L1W4	858 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	SPRED2	Q7Z698	418 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	TMCO2	Q7Z6W1	182 aa	Predicted RBP	18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	DHX37	Q8IY37	1157 aa	Known RBP	18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	C7orf31	Q8N865	590 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	ADAMTS19	Q8TE59	1207 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	ARNTL2	Q8WYA1	636 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	WNT8B	Q93098	351 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	ZFP91	Q96JP5	570 aa	Predicted RBP	18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	PIGS	Q96S52	555 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	MTCH2	Q9Y6C9	303 aa		18.87	■□□□□ 0.61
TRIM65-203	ENST00000540812	HAS3	O00219	553 aa		18.86	■□□□□ 0.61
TRIM65-203	ENST00000540812	CKB	P12277	381 aa		18.86	■□□□□ 0.61
TRIM65-203	ENST00000540812	HOXD8	P13378	290 aa	Predicted RBP	18.86	■□□□□ 0.61
TRIM65-203	ENST00000540812	WDR5	P61964	334 aa	Known RBP	18.86	■□□□□ 0.61
TRIM65-203	ENST00000540812	ZNF200	P98182	395 aa	Predicted RBP	18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms