RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 DDX25Q9UHL0 483 aaKnown RBP11.05□□□□□ -0.64
NUP85-203ENST00000540768 PES1O00541 588 aaKnown RBP11.05□□□□□ -0.64
NUP85-203ENST00000540768 MPHOSPH10O00566 681 aaKnown RBP11.05□□□□□ -0.64
NUP85-203ENST00000540768 HOXA7P31268 230 aaPredicted RBP11.05□□□□□ -0.64
NUP85-203ENST00000540768 HERVK_113P62684 666 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 CCDC96Q2M329 555 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 FIGNQ5HY92 759 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 KRT79Q5XKE5 535 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 PODNQ7Z5L7 613 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 GUF1Q8N442 669 aaKnown RBP11.05□□□□□ -0.64
NUP85-203ENST00000540768 CEP112Q8N8E3 955 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 SNX29Q8TEQ0 813 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 NAPGQ99747 312 aaPredicted RBP11.05□□□□□ -0.64
NUP85-203ENST00000540768 NOC4LQ9BVI4 516 aaKnown RBP11.05□□□□□ -0.64
NUP85-203ENST00000540768 PARD6BQ9BYG5 372 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 PSTPIP2Q9H939 334 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 PRDM4Q9UKN5 801 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 PCDHAC2Q9Y5I4 1007 aa11.05□□□□□ -0.64
NUP85-203ENST00000540768 PCNTO95613 3336 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 MYH7BA7E2Y1 1941 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 A0A1W2PQJ5 194 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 ATP8B1O43520 1251 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 GCFC2P16383 781 aaKnown RBP11.04□□□□□ -0.64
NUP85-203ENST00000540768 MTIF2P46199 727 aaKnown RBP11.04□□□□□ -0.64
NUP85-203ENST00000540768 PLA2G4AP47712 749 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 CHMP4BP1P59074 171 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 FKBP1AP62942 108 aaKnown RBP11.04□□□□□ -0.64
NUP85-203ENST00000540768 ZBED6P86452 979 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 AMPD2Q01433 879 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 KIF4BQ2VIQ3 1234 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 HYIQ5T013 277 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 CC2D1AQ6P1N0 951 aaPredicted RBP11.04□□□□□ -0.64
NUP85-203ENST00000540768 DYMQ7RTS9 669 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 DDX12PQ92771 950 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 CDK5RAP3Q96JB5 506 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 IDI2Q9BXS1 227 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 DBNDD1Q9H9R9 158 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 NYAP2Q9P242 653 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 FAM198AQ9UFP1 575 aa11.04□□□□□ -0.64
NUP85-203ENST00000540768 ZNF646O15015 1829 aaPredicted RBP11.04□□□□□ -0.64
NUP85-203ENST00000540768 DDTLA6NHG4 134 aaPredicted RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 G3V3G9 751 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 SEC31AO94979 1220 aaKnown RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 EEF2P13639 858 aaKnown RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 CDK17Q00537 523 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 PSMD2Q13200 908 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 SHROOM1Q2M3G4 852 aaPredicted RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 QRICH1Q2TAL8 776 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 TATDN1Q6P1N9 297 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 FOXR2Q6PJQ5 311 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 SH3BP5LQ7L8J4 393 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 SIAH1Q8IUQ4 282 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 DCAF4Q8WV16 495 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 GJA10Q969M2 543 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 DNAJC19Q96DA6 116 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 LRRC27Q9C0I9 530 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 HAUS4Q9H6D7 363 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 RNF181Q9P0P0 153 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 TRIM10Q9UDY6 481 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 ABCB11O95342 1321 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 ARFGEF1Q9Y6D6 1849 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 PSMD14O00487 310 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 NPM3O75607 178 aaKnown RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 TBC1D8O95759 1140 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 TRIM21P19474 475 aaKnown RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 CACNB3P54284 484 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 HDLBPQ00341 1268 aaKnown RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 LRRC63Q05C16 580 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 WHAMMP3Q1A5X7 153 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 TSR1Q2NL82 804 aaKnown RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 VWA3BQ502W6 1294 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 DACT2Q5SW24 774 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 STRIP1Q5VSL9 837 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 LRRC55Q6ZSA7 311 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 CCDC170Q8IYT3 715 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 MBOAT7Q96N66 472 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 NAP1L4Q99733 375 aaKnown RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 UBXN6Q9BZV1 441 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 GLT8D2Q9H1C3 349 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 ANKZF1Q9H8Y5 726 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 PI4KBQ9UBF8 816 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 PUF60Q9UHX1 559 aaKnown RBP11.03□□□□□ -0.64
NUP85-203ENST00000540768 SIK3Q9Y2K2 1263 aa11.03□□□□□ -0.64
NUP85-203ENST00000540768 CYP3A7-CYP3A51PA0A087WV96 503 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 FAM196BA6NMK8 535 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 EIF3CLB5ME19 914 aaKnown RBP11.02□□□□□ -0.65
NUP85-203ENST00000540768 USP17L15C9J2P7 530 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 USP17L13C9JLJ4 530 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 USP17L11C9JVI0 530 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 USP17L18D6R9N7 530 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 USP17L22D6RA61 530 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 USP17L17D6RBQ6 530 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 USP17L19D6RCP7 530 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 USP17L20D6RJB6 530 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 SASH3O75995 380 aa11.02□□□□□ -0.65
NUP85-203ENST00000540768 TFRCP02786 760 aaKnown RBP11.02□□□□□ -0.65
NUP85-203ENST00000540768 CYP3A7P24462 503 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms