RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ELP1O95163 1332 aa17.37■□□□□ 0.37
UBE3B-212ENST00000540230 TRIM43BA6NCK2 446 aa17.37■□□□□ 0.37
UBE3B-212ENST00000540230 PPFIA3O75145 1194 aa17.37■□□□□ 0.37
UBE3B-212ENST00000540230 EIF3JO75822 258 aaKnown RBP17.37■□□□□ 0.37
UBE3B-212ENST00000540230 MDM2Q00987 491 aaPredicted RBP17.37■□□□□ 0.37
UBE3B-212ENST00000540230 VSIG10LQ86VR7 867 aa17.37■□□□□ 0.37
UBE3B-212ENST00000540230 TRIM43Q96BQ3 446 aaPredicted RBP17.37■□□□□ 0.37
UBE3B-212ENST00000540230 PRDM5Q9NQX1 630 aaPredicted RBP17.37■□□□□ 0.37
UBE3B-212ENST00000540230 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
UBE3B-212ENST00000540230 NKRFO15226 690 aaKnown RBP eCLIP17.36■□□□□ 0.37
UBE3B-212ENST00000540230 ITGB8P26012 769 aa17.36■□□□□ 0.37
UBE3B-212ENST00000540230 CDK7P50613 346 aa17.36■□□□□ 0.37
UBE3B-212ENST00000540230 EVCP57679 992 aa17.36■□□□□ 0.37
UBE3B-212ENST00000540230 PSMC6P62333 389 aa17.36■□□□□ 0.37
UBE3B-212ENST00000540230 MRPS9P82933 396 aaKnown RBP17.36■□□□□ 0.37
UBE3B-212ENST00000540230 ARHGAP1Q07960 439 aa17.36■□□□□ 0.37
UBE3B-212ENST00000540230 SMARCC2Q8TAQ2 1214 aa17.36■□□□□ 0.37
UBE3B-212ENST00000540230 VTI1AQ96AJ9 217 aa17.36■□□□□ 0.37
UBE3B-212ENST00000540230 NCOA5Q9HCD5 579 aaKnown RBP17.36■□□□□ 0.37
UBE3B-212ENST00000540230 DDX41Q9UJV9 622 aaKnown RBP17.36■□□□□ 0.37
UBE3B-212ENST00000540230 CYP46A1Q9Y6A2 500 aa17.36■□□□□ 0.37
UBE3B-212ENST00000540230 MYH7BA7E2Y1 1941 aa17.35■□□□□ 0.37
UBE3B-212ENST00000540230 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
UBE3B-212ENST00000540230 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
UBE3B-212ENST00000540230 CCT2P78371 535 aaKnown RBP17.35■□□□□ 0.37
UBE3B-212ENST00000540230 PURAQ00577 322 aaKnown RBP17.35■□□□□ 0.37
UBE3B-212ENST00000540230 FAAP100Q0VG06 881 aa17.35■□□□□ 0.37
UBE3B-212ENST00000540230 ANKRD33Q7Z3H0 272 aa17.35■□□□□ 0.37
UBE3B-212ENST00000540230 PPP1R13LQ8WUF5 828 aa17.35■□□□□ 0.37
UBE3B-212ENST00000540230 PSTPIP2Q9H939 334 aa17.35■□□□□ 0.37
UBE3B-212ENST00000540230 MRVI1Q9Y6F6 885 aa17.35■□□□□ 0.37
UBE3B-212ENST00000540230 STXBP3O00186 592 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 ARVCFO00192 962 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 MYL3P08590 195 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 CLTBP09497 229 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 CCND2P30279 289 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 NTRK3Q16288 839 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 CUL5Q93034 780 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 PHKBQ93100 1093 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 DOCK5Q9H7D0 1870 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 SCN10AQ9Y5Y9 1956 aa17.34■□□□□ 0.37
UBE3B-212ENST00000540230 LAMA2P24043 3122 aaKnown RBP17.33■□□□□ 0.37
UBE3B-212ENST00000540230 A6NJR5 290 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 ZEB2O60315 1214 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 SORBS3O60504 671 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 GH1P01241 217 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 CPT1AP50416 773 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 NAPAP54920 295 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 SP2Q02086 613 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 FAM126BQ8IXS8 530 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 SLC43A3Q8NBI5 491 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 AFG1LQ8WV93 481 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 BCAS3Q9H6U6 928 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 RTEL1Q9NZ71 1219 aa17.33■□□□□ 0.37
UBE3B-212ENST00000540230 ADAMTS3O15072 1205 aa17.32■□□□□ 0.36
UBE3B-212ENST00000540230 SEMA3FQ13275 785 aa17.32■□□□□ 0.36
UBE3B-212ENST00000540230 ITGA7Q13683 1181 aa17.32■□□□□ 0.36
UBE3B-212ENST00000540230 PKN1Q16512 942 aa17.32■□□□□ 0.36
UBE3B-212ENST00000540230 PGBD1Q96JS3 809 aa17.32■□□□□ 0.36
UBE3B-212ENST00000540230 TOX2Q96NM4 488 aa17.32■□□□□ 0.36
UBE3B-212ENST00000540230 PDRG1Q9NUG6 133 aa17.32■□□□□ 0.36
UBE3B-212ENST00000540230 BARHL2Q9NY43 387 aa17.32■□□□□ 0.36
UBE3B-212ENST00000540230 PRKAG2Q9UGJ0 569 aa17.32■□□□□ 0.36
UBE3B-212ENST00000540230 CCDC196A0A1B0GTZ2 297 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 CABYRO75952 493 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 MMP3P08254 477 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 UBA1P22314 1058 aaKnown RBP17.31■□□□□ 0.36
UBE3B-212ENST00000540230 BMP8BP34820 402 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 PFKFB3Q16875 520 aaPredicted RBP17.31■□□□□ 0.36
UBE3B-212ENST00000540230 C8orf34Q49A92 452 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 BADQ92934 168 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 INPP4AQ96PE3 977 aaPredicted RBP17.31■□□□□ 0.36
UBE3B-212ENST00000540230 POLR3EQ9NVU0 708 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 DCDC2CA8MYV0 355 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 KIAA0355O15063 1070 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 CD4P01730 458 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 SCG2P13521 617 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 FXR1P51114 621 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBE3B-212ENST00000540230 ANAPC15P60006 121 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 STK3Q13188 491 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 PCNX4Q63HM2 1172 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 PPP1R18Q6NYC8 613 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 RIC8AQ9NPQ8 531 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 TMEM39AQ9NV64 488 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 TBX21Q9UL17 535 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 MROH7Q68CQ1 1323 aa17.31■□□□□ 0.36
UBE3B-212ENST00000540230 SMCO2A6NFE2 343 aa17.3■□□□□ 0.36
UBE3B-212ENST00000540230 PRPF3O43395 683 aaKnown RBP17.3■□□□□ 0.36
UBE3B-212ENST00000540230 GGPS1O95749 300 aa17.3■□□□□ 0.36
UBE3B-212ENST00000540230 IFNAR1P17181 557 aa17.3■□□□□ 0.36
UBE3B-212ENST00000540230 MYSM1Q5VVJ2 828 aa17.3■□□□□ 0.36
UBE3B-212ENST00000540230 DHX37Q8IY37 1157 aaKnown RBP17.3■□□□□ 0.36
UBE3B-212ENST00000540230 EMID1Q96A84 441 aaPredicted RBP17.3■□□□□ 0.36
UBE3B-212ENST00000540230 IL17RAQ96F46 866 aa17.3■□□□□ 0.36
UBE3B-212ENST00000540230 ZNF274Q96GC6 653 aaPredicted RBP17.3■□□□□ 0.36
UBE3B-212ENST00000540230 MTG1Q9BT17 334 aaPredicted RBP17.3■□□□□ 0.36
UBE3B-212ENST00000540230 SLC26A6Q9BXS9 759 aa17.3■□□□□ 0.36
UBE3B-212ENST00000540230 UBE2OQ9C0C9 1292 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms