RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 FOXC1Q12948 553 aa10.94□□□□□ -0.66
MDH1-215ENST00000539945 AP3B2Q13367 1082 aa10.94□□□□□ -0.66
MDH1-215ENST00000539945 ZYXQ15942 572 aaKnown RBP10.94□□□□□ -0.66
MDH1-215ENST00000539945 UBE2SQ16763 222 aa10.94□□□□□ -0.66
MDH1-215ENST00000539945 CTC1Q2NKJ3 1217 aa10.94□□□□□ -0.66
MDH1-215ENST00000539945 PPP4R3AQ6IN85 833 aa10.94□□□□□ -0.66
MDH1-215ENST00000539945 CCDC34Q96HJ3 373 aa10.94□□□□□ -0.66
MDH1-215ENST00000539945 NAP1L4Q99733 375 aaKnown RBP10.94□□□□□ -0.66
MDH1-215ENST00000539945 SERTAD1Q9UHV2 236 aa10.94□□□□□ -0.66
MDH1-215ENST00000539945 USP17L15C9J2P7 530 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP17L13C9JLJ4 530 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP17L11C9JVI0 530 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP17L18D6R9N7 530 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP17L22D6RA61 530 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP17L17D6RBQ6 530 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP17L19D6RCP7 530 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP17L20D6RJB6 530 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 PIK3CDO00329 1044 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 FOSP01100 380 aaPredicted RBP10.93□□□□□ -0.66
MDH1-215ENST00000539945 SLFN14P0C7P3 912 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 GCFC2P16383 781 aaKnown RBP10.93□□□□□ -0.66
MDH1-215ENST00000539945 PTPRAP18433 802 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP11P51784 963 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP14P54578 494 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP17L24Q0WX57 530 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 ZRSR1Q15695 479 aaKnown RBP10.93□□□□□ -0.66
MDH1-215ENST00000539945 NOL9Q5SY16 702 aaKnown RBP10.93□□□□□ -0.66
MDH1-215ENST00000539945 PRAMEF18Q5VWM3 479 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 USP17L6PQ6QN14 398 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 SH3RF1Q7Z6J0 888 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 PDILTQ8N807 584 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 ERCC4Q92889 916 aaPredicted RBP10.93□□□□□ -0.66
MDH1-215ENST00000539945 KIFC2Q96AC6 838 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 KLRG1Q96E93 195 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 PDLIM2Q96JY6 352 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 AK8Q96MA6 479 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 WRNIP1Q96S55 665 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 NAT10Q9H0A0 1025 aaKnown RBP10.93□□□□□ -0.66
MDH1-215ENST00000539945 DNAJC25Q9H1X3 360 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 AS3MTQ9HBK9 375 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 CBX8Q9HC52 389 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 PICK1Q9NRD5 415 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 SSC5DA1L4H1 1573 aa10.93□□□□□ -0.66
MDH1-215ENST00000539945 ZC3H4Q9UPT8 1303 aaKnown RBP10.93□□□□□ -0.66
MDH1-215ENST00000539945 A0A087X0B3 334 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 OPLAHO14841 1288 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 AXIN1O15169 862 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 TXLNAP40222 546 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 RPIAP49247 311 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 NLRP12P59046 1061 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 PNOCQ13519 176 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 POSTNQ15063 836 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 USH1GQ495M9 461 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 NT5DC1Q5TFE4 455 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 C11orf57Q6ZUT1 292 aaPredicted RBP10.92□□□□□ -0.66
MDH1-215ENST00000539945 CEP57L1Q8IYX8 460 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 IQUBQ8NA54 791 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 PRPF38AQ8NAV1 312 aaKnown RBP10.92□□□□□ -0.66
MDH1-215ENST00000539945 ZNF280CQ8ND82 737 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 CRYGNQ8WXF5 182 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 ZKSCAN4Q969J2 545 aaPredicted RBP10.92□□□□□ -0.66
MDH1-215ENST00000539945 DCPSQ96C86 337 aaKnown RBP10.92□□□□□ -0.66
MDH1-215ENST00000539945 MTMR9Q96QG7 549 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 SLF1Q9BQI6 1058 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 ANO3Q9BYT9 981 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 CCSER1Q9C0I3 900 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 POLR2AP24928 1970 aaKnown RBP10.92□□□□□ -0.66
MDH1-215ENST00000539945 CYP3A7-CYP3A51PA0A087WV96 503 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 TDP2O95551 362 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 AVPP01185 164 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 VCAM1P19320 739 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 CYP3A7P24462 503 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 SARSP49591 514 aaKnown RBP10.92□□□□□ -0.66
MDH1-215ENST00000539945 BACE1P56817 501 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 SPP2Q13103 211 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 MTMR2Q13614 643 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 IQCB1Q15051 598 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 CALCRLQ16602 461 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 MOXD1Q6UVY6 613 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
MDH1-215ENST00000539945 SULF1Q8IWU6 871 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 IGSF22Q8N9C0 903 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 SPATA20Q8TB22 786 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 ZC3H15Q8WU90 426 aaKnown RBP10.92□□□□□ -0.66
MDH1-215ENST00000539945 DHX58Q96C10 678 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 C12orf42Q96LP6 360 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 MBOAT7Q96N66 472 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 BPIFA3Q9BQP9 254 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 FBXO28Q9NVF7 368 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 MRPL11Q9Y3B7 192 aaKnown RBP10.92□□□□□ -0.66
MDH1-215ENST00000539945 PCDHA5Q9Y5H7 936 aa10.92□□□□□ -0.66
MDH1-215ENST00000539945 MYH7BA7E2Y1 1941 aa10.91□□□□□ -0.66
MDH1-215ENST00000539945 ABCB11O95342 1321 aa10.91□□□□□ -0.66
MDH1-215ENST00000539945 RCCD1A6NED2 376 aa10.91□□□□□ -0.66
MDH1-215ENST00000539945 SPDYE3A6NKU9 549 aa10.91□□□□□ -0.66
MDH1-215ENST00000539945 C19orf81C9J6K1 198 aa10.91□□□□□ -0.66
MDH1-215ENST00000539945 FOXN1O15353 648 aa10.91□□□□□ -0.66
MDH1-215ENST00000539945 SLC37A4O43826 429 aa10.91□□□□□ -0.66
MDH1-215ENST00000539945 GRIN3BO60391 1043 aa10.91□□□□□ -0.66
MDH1-215ENST00000539945 USP2O75604 605 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms