RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CYP2D7A0A087X1C5 515 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 KCNQ4P56696 695 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 NEDD9Q14511 834 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 CDC37Q16543 378 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-205ENST00000539661 RNF187Q5TA31 235 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-205ENST00000539661 PDXDC1Q6P996 788 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 RRAGAQ7L523 313 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 LRRC15Q8TF66 581 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 IFT81Q8WYA0 676 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 ZKSCAN4Q969J2 545 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-205ENST00000539661 PLCB1Q9NQ66 1216 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 FAM207AQ9NSI2 230 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-205ENST00000539661 ZNF804BA4D1E1 1349 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 GOLGA6L10A6NI86 522 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 EPHB6O15197 1021 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 PREPLQ4J6C6 727 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-205ENST00000539661 CCDC13Q8IYE1 715 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 SEMA6BQ9H3T3 888 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 MMRN2Q9H8L6 949 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 TMBIM4Q9HC24 238 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 CEP83Q9Y592 693 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 A0A1B0GUL6 1792 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 GOLGA6L7A0A1B0GV03 622 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 TMCO5BA8MYB1 307 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 PSEN1P49768 467 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 RASSF7Q02833 373 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 CASKIN2Q8WXE0 1202 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 SYN2Q92777 582 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-205ENST00000539661 EEF2KMTQ96G04 330 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 MS4A14Q96JA4 679 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 PLIN2Q99541 437 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 ABCF2Q9UG63 623 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 PCDHA6Q9UN73 950 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 PCDHA8Q9Y5H6 950 aa19.43■□□□□ 0.7
RAB40C-205ENST00000539661 IGHMBP2P38935 993 aaKnown RBP19.42■□□□□ 0.7
RAB40C-205ENST00000539661 HDLBPQ00341 1268 aaKnown RBP19.42■□□□□ 0.7
RAB40C-205ENST00000539661 CCDC50Q8IVM0 306 aa19.42■□□□□ 0.7
RAB40C-205ENST00000539661 LAMB1P07942 1786 aa19.42■□□□□ 0.7
RAB40C-205ENST00000539661 CES2O00748 559 aa19.42■□□□□ 0.7
RAB40C-205ENST00000539661 FCER1AP12319 257 aa19.42■□□□□ 0.7
RAB40C-205ENST00000539661 NT5C2P49902 561 aa19.42■□□□□ 0.7
RAB40C-205ENST00000539661 TNNC1P63316 161 aa19.42■□□□□ 0.7
RAB40C-205ENST00000539661 FOXR2Q6PJQ5 311 aa19.42■□□□□ 0.7
RAB40C-205ENST00000539661 KIAA0895Q8NCT3 520 aa19.42■□□□□ 0.7
RAB40C-205ENST00000539661 GIMAP7Q8NHV1 300 aa19.42■□□□□ 0.7
RAB40C-205ENST00000539661 MYBP10242 640 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 CYP19A1P11511 503 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-205ENST00000539661 CDR1P51861 262 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 IFT88Q13099 833 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 WLSQ5T9L3 541 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 CASZ1Q86V15 1759 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 USP17L12C9JPN9 530 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 USP17L21D6R901 530 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 E7EVH7 732 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 SLC1A4P43007 532 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 GFPT1Q06210 699 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-205ENST00000539661 NAB2Q15742 525 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 HGSNATQ68CP4 663 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 CCDC121Q6ZUS5 278 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 TAX1BP1Q86VP1 789 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 MAGEC3Q8TD91 643 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 CYFIP2Q96F07 1278 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 MCM8Q9UJA3 840 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 PLAAQ9Y263 795 aa19.41■□□□□ 0.7
RAB40C-205ENST00000539661 BUB1O43683 1085 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 GNAQP50148 359 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 GUCY2FP51841 1108 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 SEC24CP53992 1094 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 DYNLL1P63167 89 aaKnown RBP19.4■□□□□ 0.7
RAB40C-205ENST00000539661 LRRC63Q05C16 580 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 ARMC9Q7Z3E5 817 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 CACNA2D4Q7Z3S7 1137 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 RASGRP4Q8TDF6 673 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 INPP4AQ96PE3 977 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-205ENST00000539661 ISCUQ9H1K1 167 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 TAF1DQ9H5J8 278 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-205ENST00000539661 SLC40A1Q9NP59 571 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 PCDHGC5Q9Y5F6 944 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 UTRNP46939 3433 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 BAZ2BQ9UIF8 2168 aaKnown RBP19.4■□□□□ 0.7
RAB40C-205ENST00000539661 BIRC3Q13489 604 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 INF2Q27J81 1249 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 SLC9C1Q4G0N8 1177 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 CCDC152Q4G0S7 254 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 CEP85LQ5SZL2 805 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 MEI1Q5TIA1 1274 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 AEBP2Q6ZN18 517 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-205ENST00000539661 MAATS1Q7Z4T9 603 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 ANKRD13CQ8N6S4 541 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 KRT12Q99456 494 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 ZBTB1Q9Y2K1 713 aa19.4■□□□□ 0.7
RAB40C-205ENST00000539661 PVALEFA0A1B0GWK0 134 aa19.39■□□□□ 0.7
RAB40C-205ENST00000539661 ESYT3A0FGR9 886 aa19.39■□□□□ 0.7
RAB40C-205ENST00000539661 GMNCA6NCL1 334 aa19.39■□□□□ 0.7
RAB40C-205ENST00000539661 GCOM1H8Y6P7 765 aaPredicted RBP19.39■□□□□ 0.7
RAB40C-205ENST00000539661 NKRFO15226 690 aaKnown RBP eCLIP19.39■□□□□ 0.7
RAB40C-205ENST00000539661 NMT2O60551 498 aa19.39■□□□□ 0.7
RAB40C-205ENST00000539661 OR52Z1P0C646 297 aa19.39■□□□□ 0.7
RAB40C-205ENST00000539661 MYZAPP0CAP1 466 aa19.39■□□□□ 0.7
RAB40C-205ENST00000539661 CUL1Q13616 776 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms