RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 E7EWF7 191 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 SKIP12755 728 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 PTPREP23469 700 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 PAX3P23760 479 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 CDC25AP30304 524 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 PDE6CP51160 858 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 RAD23BP54727 409 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 WDR59Q6PJI9 974 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 ATP8B4Q8TF62 1192 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 TLCD1Q96CP7 247 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 DDX27Q96GQ7 796 aaKnown RBP13.61□□□□□ -0.23
USP3-203ENST00000538686 CARD9Q9H257 536 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 NHEJ1Q9H9Q4 299 aaPredicted RBP13.61□□□□□ -0.23
USP3-203ENST00000538686 TRPV5Q9NQA5 729 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 RMND1Q9NWS8 449 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 UTP6Q9NYH9 597 aaKnown RBP13.61□□□□□ -0.23
USP3-203ENST00000538686 CYP39A1Q9NYL5 469 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 TUBGCP4Q9UGJ1 667 aa13.61□□□□□ -0.23
USP3-203ENST00000538686 ATP5HO75947 161 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 SUN1O94901 812 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 MMEP08473 750 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 SULT2A1Q06520 285 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 CBX3Q13185 183 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 AKNAD1Q5T1N1 836 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 KCNV2Q8TDN2 545 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 ASAP3Q8TDY4 903 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 EAF2Q96CJ1 260 aaPredicted RBP13.6□□□□□ -0.23
USP3-203ENST00000538686 LTV1Q96GA3 475 aaPredicted RBP13.6□□□□□ -0.23
USP3-203ENST00000538686 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 VPS16Q9H269 839 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 PICK1Q9NRD5 415 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 STK38LQ9Y2H1 464 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 MRC1P22897 1456 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 ZNF609O15014 1411 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 MYH13Q9UKX3 1938 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 MROH7Q68CQ1 1323 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 MINK1Q8N4C8 1332 aaPredicted RBP13.6□□□□□ -0.23
USP3-203ENST00000538686 KCNJ18B7U540 433 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 PPP1R3GB7ZBB8 358 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 MYBL1P10243 752 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 CYP11B2P19099 503 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 VCAM1P19320 739 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 STX17P56962 302 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 PRPF4BQ13523 1007 aaKnown RBP13.6□□□□□ -0.23
USP3-203ENST00000538686 KCNJ12Q14500 433 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 CROCCP2Q86T23 111 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 CHMP7Q8WUX9 453 aaPredicted RBP13.6□□□□□ -0.23
USP3-203ENST00000538686 RSPH1Q8WYR4 309 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 HAPLN3Q96S86 360 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 SMC6Q96SB8 1091 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 ABCF3Q9NUQ8 709 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 TMOD4Q9NZQ9 345 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 DDX25Q9UHL0 483 aaKnown RBP13.6□□□□□ -0.23
USP3-203ENST00000538686 TMEM98Q9Y2Y6 226 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 USP15Q9Y4E8 981 aaPredicted RBP13.6□□□□□ -0.23
USP3-203ENST00000538686 NPATQ14207 1427 aa13.6□□□□□ -0.23
USP3-203ENST00000538686 RGPD1P0DJD0 1748 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 CETN3O15182 167 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 UPP2O95045 317 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 TPBGLP0DKB5 382 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 MYBP10242 640 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 CCNB1P14635 433 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 MRPS25P82663 173 aaKnown RBP13.59□□□□□ -0.23
USP3-203ENST00000538686 TRIM29Q14134 588 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 MAP7Q14244 749 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 PLS1Q14651 629 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 KPNB1Q14974 876 aaKnown RBP13.59□□□□□ -0.23
USP3-203ENST00000538686 MUM1Q2TAK8 710 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 MB21D1Q8N884 522 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 FAM114A2Q9NRY5 505 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 BARX2Q9UMQ3 279 aaPredicted RBP13.59□□□□□ -0.23
USP3-203ENST00000538686 MAPK8IP1Q9UQF2 711 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
USP3-203ENST00000538686 RCCD1A6NED2 376 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 GOLGA8BA8MQT2 603 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 LGALS16A8MUM7 142 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 BACH1O14867 736 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 OAS1P00973 400 aaKnown RBP13.59□□□□□ -0.23
USP3-203ENST00000538686 CHGBP05060 677 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
USP3-203ENST00000538686 SESN3P58005 492 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
USP3-203ENST00000538686 LSAMPQ13449 338 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 EIF4A2Q14240 407 aaKnown RBP13.59□□□□□ -0.23
USP3-203ENST00000538686 DIXDC1Q155Q3 683 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 GSTA3Q16772 222 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 MFSD4BQ5TF39 518 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 PIGOQ8TEQ8 1089 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 IRGQQ8WZA9 623 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 ELAC2Q9BQ52 826 aaKnown RBP13.59□□□□□ -0.23
USP3-203ENST00000538686 ALG1Q9BT22 464 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 RXFP1Q9HBX9 757 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 HELLSQ9NRZ9 838 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 TAB2Q9NYJ8 693 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 SH3GLB1Q9Y371 365 aa13.59□□□□□ -0.23
USP3-203ENST00000538686 WDR19Q8NEZ3 1342 aa13.58□□□□□ -0.24
USP3-203ENST00000538686 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms