RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 IP6K1Q92551 441 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 SPC25Q9HBM1 224 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TNRQ92752 1358 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 ZNF532Q9HCE3 1301 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 MIF4GDA9UHW6 222 aaKnown RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 SGK1O00141 431 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 CTIFO43310 598 aaKnown RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 GGPS1O95749 300 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 LRRC63Q05C16 580 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 LRIG3Q6UXM1 1119 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TTC16Q8NEE8 873 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 HDAC11Q96DB2 347 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 PNMA6EA0A0J9YXQ4 647 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 EXOC1LA0A1B0GW35 172 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 RAPGEF3O95398 923 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 GCFC2P16383 781 aaKnown RBP7.49□□□□□ -1.21
SORT1-209ENST00000538502 PLTPP55058 493 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 ALCAMQ13740 583 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TAF12Q16514 161 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TBC1D7Q9P0N9 293 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 ZFP69BQ9UJL9 534 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 PCDHA5Q9Y5H7 936 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 WDR7Q9Y4E6 1490 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 USP19O94966 1318 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 MCF2LO15068 1137 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 CHMP2AO43633 222 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TRPA1O75762 1119 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 TNNI1P19237 187 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 SERPINB10P48595 397 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 PDE1BQ01064 536 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 CTDSPL2Q05D32 466 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 HACE1Q8IYU2 909 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 PHACTR3Q96KR7 559 aa7.49□□□□□ -1.21
SORT1-209ENST00000538502 SOWAHDA6NJG2 315 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 ENC1O14682 589 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 MAPK4P31152 587 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 STAT2P52630 851 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 DPCR1Q3MIW9 517 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 ENAHQ8N8S7 591 aaPredicted RBP7.48□□□□□ -1.21
SORT1-209ENST00000538502 LINC00301Q8NCQ3 95 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 C3orf20Q8ND61 904 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 ICA1LQ8NDH6 482 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 SUCLG2Q96I99 432 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 YIPF3Q9GZM5 350 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 ANKFY1Q9P2R3 1169 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 ARHGAP26Q9UNA1 814 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 MOCS3O95396 460 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 CD19P15391 556 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 HOXC9P31274 260 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 SERPINB4P48594 390 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 KLHL38Q2WGJ6 581 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 LRRC43Q8N309 656 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 CEP70Q8NHQ1 597 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 ATP6V1G3Q96LB4 118 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 ECT2Q9H8V3 914 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 SRPRBQ9Y5M8 271 aaKnown RBP7.48□□□□□ -1.21
SORT1-209ENST00000538502 FAM187AA6NFU0 413 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 RANBP1P43487 201 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 VPS41P49754 854 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 GCKRQ14397 625 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 TCP11X2Q5H9J9 407 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 G2E3Q7L622 706 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 WDR75Q8IWA0 830 aaKnown RBP7.48□□□□□ -1.21
SORT1-209ENST00000538502 MB21D1Q8N884 522 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 PAWRQ96IZ0 340 aaKnown RBP7.48□□□□□ -1.21
SORT1-209ENST00000538502 CXorf56Q9H5V9 222 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 PCDHA12Q9UN75 941 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 A6NJR5 290 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 EEF1B2P24534 225 aaKnown RBP7.48□□□□□ -1.21
SORT1-209ENST00000538502 USP40Q9NVE5 1235 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 DDX25Q9UHL0 483 aaKnown RBP7.48□□□□□ -1.21
SORT1-209ENST00000538502 WDR62O43379 1518 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 FOSP01100 380 aaPredicted RBP7.48□□□□□ -1.21
SORT1-209ENST00000538502 PLS3P13797 630 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 GGCXP38435 758 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 PTH1RQ03431 593 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 NT5C1BQ96P26 610 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 ELAC2Q9BQ52 826 aaKnown RBP7.48□□□□□ -1.21
SORT1-209ENST00000538502 ZC3H12CQ9C0D7 883 aaKnown RBP7.48□□□□□ -1.21
SORT1-209ENST00000538502 SNX5Q9Y5X3 404 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 MRFAP1Q9Y605 127 aa7.48□□□□□ -1.21
SORT1-209ENST00000538502 KRT4P19013 534 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 FKBP3Q00688 224 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 BIRC2Q13490 618 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 RFX6Q8HWS3 928 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ZNF579Q8NAF0 562 aaKnown RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 CHMP6Q96FZ7 201 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 EYA1Q99502 592 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 EPN3Q9H201 632 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 TMEM206Q9H813 350 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ANLNQ9NQW6 1124 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 PCDHA4Q9UN74 947 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 SH3TC1Q8TE82 1336 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 MYOM2P54296 1465 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 ATP10DQ9P241 1426 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 A0A1B0GW55 424 aa7.47□□□□□ -1.21
SORT1-209ENST00000538502 EIF3DO15371 548 aaKnown RBP eCLIP7.47□□□□□ -1.21
SORT1-209ENST00000538502 MEFVO15553 781 aaPredicted RBP7.47□□□□□ -1.21
SORT1-209ENST00000538502 MED7O43513 233 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms