RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 RIC8AQ9NPQ8 531 aa15.15■□□□□ 0.02
COPS7A-207ENST00000538375 PCDHA6Q9UN73 950 aa15.15■□□□□ 0.02
COPS7A-207ENST00000538375 PCDHA8Q9Y5H6 950 aa15.15■□□□□ 0.02
COPS7A-207ENST00000538375 MCM3APO60318 1980 aa15.15■□□□□ 0.02
COPS7A-207ENST00000538375 RBM47A0AV96 593 aaKnown RBP15.14■□□□□ 0.01
COPS7A-207ENST00000538375 MYADML2A6NDP7 307 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 EVI5O60447 810 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 ADAMTS4O75173 837 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 GJA9P57773 515 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 KCNA10Q16322 511 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 DUSP28Q4G0W2 176 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 PPP1R18Q6NYC8 613 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 PCSK9Q8NBP7 692 aaKnown RBP15.14■□□□□ 0.01
COPS7A-207ENST00000538375 OR6J1Q8NGC5 347 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 IL31RAQ8NI17 732 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 COPS5Q92905 334 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 KIF2CQ99661 725 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 EHMT1Q9H9B1 1298 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 LIMCH1Q9UPQ0 1083 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 GNEQ9Y223 722 aaKnown RBP15.14■□□□□ 0.01
COPS7A-207ENST00000538375 MRVI1Q9Y6F6 885 aa15.14■□□□□ 0.01
COPS7A-207ENST00000538375 LCTP09848 1927 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 DEXIO95424 95 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 LARGE1O95461 756 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 COL6A1P12109 1028 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 ACLYP53396 1101 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 NLRP5P59047 1200 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 FSCN1Q16658 493 aaKnown RBP15.13■□□□□ 0.01
COPS7A-207ENST00000538375 LY6KQ17RY6 165 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 JAKMIP3Q5VZ66 844 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 KLHDC9Q8NEP7 349 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 PGBD1Q96JS3 809 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 GLT8D2Q9H1C3 349 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 TMEM260Q9NX78 707 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 VPS54Q9P1Q0 977 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 Q9Y3F1 56 aa15.13■□□□□ 0.01
COPS7A-207ENST00000538375 NKRFO15226 690 aaKnown RBP eCLIP15.12■□□□□ 0.01
COPS7A-207ENST00000538375 ZEB2O60315 1214 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 SORBS3O60504 671 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 ARIH2O95376 493 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 FOSP01100 380 aaPredicted RBP15.12■□□□□ 0.01
COPS7A-207ENST00000538375 ASGR1P07306 291 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 GNA11P29992 359 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 RABEP1Q15276 862 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 GNPTABQ3T906 1256 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 CCDC148Q8NFR7 591 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 TSEN34Q9BSV6 310 aaKnown RBP15.12■□□□□ 0.01
COPS7A-207ENST00000538375 BACH2Q9BYV9 841 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 UPF3AQ9H1J1 476 aaKnown RBP15.12■□□□□ 0.01
COPS7A-207ENST00000538375 PRO3102Q9H379 93 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 PHF24Q9UPV7 400 aa15.12■□□□□ 0.01
COPS7A-207ENST00000538375 GH1P01241 217 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 MYL3P08590 195 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 MRPS9P82933 396 aaKnown RBP15.11■□□□□ 0.01
COPS7A-207ENST00000538375 BRDTQ58F21 947 aaPredicted RBP15.11■□□□□ 0.01
COPS7A-207ENST00000538375 PCNX4Q63HM2 1172 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 SLC39A5Q6ZMH5 540 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 NLRX1Q86UT6 975 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 DHX37Q8IY37 1157 aaKnown RBP15.11■□□□□ 0.01
COPS7A-207ENST00000538375 C7orf61Q8IZ16 206 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 GLT1D1Q96MS3 346 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 AIFM3Q96NN9 605 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 STARD7Q9NQZ5 370 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 ORC3Q9UBD5 711 aaPredicted RBP15.11■□□□□ 0.01
COPS7A-207ENST00000538375 DDX41Q9UJV9 622 aaKnown RBP15.11■□□□□ 0.01
COPS7A-207ENST00000538375 NR2E3Q9Y5X4 410 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 TRIOBPQ9H2D6 2365 aa15.11■□□□□ 0.01
COPS7A-207ENST00000538375 A0A1W2PQ45 241 aaPredicted RBP15.1■□□□□ 0.01
COPS7A-207ENST00000538375 A0A1W2PQY0 241 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 MOXD2PA6NHM9 499 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 ST18O60284 1047 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 STAM2O75886 525 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 ZNF76P36508 570 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 CPT1AP50416 773 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 CHMP4BP1P59074 171 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 LRRC26Q2I0M4 334 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 XRRA1Q6P2D8 792 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 CCDC62Q6P9F0 684 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 KCNV1Q6PIU1 500 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 CXCL17Q6UXB2 119 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 REXO1Q8N1G1 1221 aaKnown RBP15.1■□□□□ 0.01
COPS7A-207ENST00000538375 BICD2Q8TD16 824 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 GTF3C6Q969F1 213 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 ZSCAN31Q96LW9 406 aaPredicted RBP15.1■□□□□ 0.01
COPS7A-207ENST00000538375 ZMYND12Q9H0C1 365 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 SH3GLB2Q9NR46 395 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 ATP11BQ9Y2G3 1177 aa15.1■□□□□ 0.01
COPS7A-207ENST00000538375 ESYT2A0FGR8 921 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 CTAGE5O15320 804 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 RGS20O76081 388 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 CTDNEP1O95476 244 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 XBP1P17861 261 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 CST5P28325 142 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-207ENST00000538375 AP3B2Q13367 1082 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 CCSAPQ6IQ19 270 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-207ENST00000538375 CCDC83Q8IWF9 413 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 RASGRP4Q8TDF6 673 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 AFG1LQ8WV93 481 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 WASF1Q92558 559 aa15.09■□□□□ 0.01
COPS7A-207ENST00000538375 TBC1D32Q96NH3 1257 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms