RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 MYRFLQ96LU7 910 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 DISC1Q9NRI5 854 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 KBTBD4Q9NVX7 518 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 CRIM1Q9NZV1 1036 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 MINPP1Q9UNW1 487 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 PA2G4Q9UQ80 394 aaKnown RBP5.27□□□□□ -1.57
SNHG1-208ENST00000538266 ACTL7BQ9Y614 415 aa5.27□□□□□ -1.57
SNHG1-208ENST00000538266 LTBP3Q9NS15 1303 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 TMPRSS2O15393 492 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 RNGTTO60942 597 aaKnown RBP5.26□□□□□ -1.57
SNHG1-208ENST00000538266 TAF5LO75529 589 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 IFIT1P09914 478 aaKnown RBP5.26□□□□□ -1.57
SNHG1-208ENST00000538266 H2AFB1P0C5Y9 115 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 H2AFB2P0C5Z0 115 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 SLC5A1P13866 664 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 MAP4P27816 1152 aaKnown RBP5.26□□□□□ -1.57
SNHG1-208ENST00000538266 RFX5P48382 616 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-208ENST00000538266 GPSM2P81274 684 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 INPP5AQ14642 412 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 PUM3Q15397 648 aaKnown RBP5.26□□□□□ -1.57
SNHG1-208ENST00000538266 LRRC24Q50LG9 513 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 SGO2Q562F6 1265 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 NKAPLQ5M9Q1 402 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 PRR23CQ6ZRP0 262 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-208ENST00000538266 BEND4Q6ZU67 534 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 ERMP1Q7Z2K6 904 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 VPS37DQ86XT2 251 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 CLEC10AQ8IUN9 316 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 TRIM42Q8IWZ5 723 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 FAM20CQ8IXL6 584 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 FBLIM1Q8WUP2 373 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 JDP2Q8WYK2 163 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 FANCD2OSQ96PS1 177 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 PSMD1Q99460 953 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 EYA3Q99504 573 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 PUS3Q9BZE2 481 aaKnown RBP5.26□□□□□ -1.57
SNHG1-208ENST00000538266 RWDD1Q9H446 243 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-208ENST00000538266 METTL5Q9NRN9 209 aaKnown RBP5.26□□□□□ -1.57
SNHG1-208ENST00000538266 FAM105AQ9NUU6 356 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 EXOC6BQ9Y2D4 811 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 HIF3AQ9Y2N7 669 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 LEMD3Q9Y2U8 911 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 RAXQ9Y2V3 346 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 RIPOR2Q9Y4F9 1068 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 SNCAIPQ9Y6H5 919 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 COL4A1P02462 1669 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 FER1L6Q2WGJ9 1857 aa5.26□□□□□ -1.57
SNHG1-208ENST00000538266 ZNF804BA4D1E1 1349 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 FAM95CA0A1B0GW59 222 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 PPIP5K2O43314 1243 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 RAB11FIP3O75154 756 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 PDE8BO95263 885 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 NFICP08651 508 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 IARSP41252 1262 aaKnown RBP5.25□□□□□ -1.57
SNHG1-208ENST00000538266 ERVK-24P63145 666 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 FANCCQ00597 558 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 LMNB2Q03252 620 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 FAM160A1Q05DH4 1040 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 TFCP2Q12800 502 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 HDAC1Q13547 482 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-208ENST00000538266 SEPT6Q14141 434 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 NFKBIBQ15653 356 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 ATP2B3Q16720 1220 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 AOC3Q16853 763 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 RSPO4Q2I0M5 234 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-208ENST00000538266 CAVIN4Q5BKX8 364 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 GORABQ5T7V8 394 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 C9orf131Q5VYM1 1079 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-208ENST00000538266 HDXQ7Z353 690 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 ATG9AQ7Z3C6 839 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 ZNF804AQ7Z570 1209 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 SIRT2Q8IXJ6 389 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 NIM1KQ8IY84 436 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 TBC1D16Q8TBP0 767 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 LPIN2Q92539 896 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 ELMO3Q96BJ8 720 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 KIF1BPQ96EK5 621 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 CCDC136Q96JN2 1154 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 FAM83CQ9BQN1 747 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 YIPF2Q9BWQ6 316 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 RTFDC1Q9BY42 306 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-208ENST00000538266 LRRCC1Q9C099 1032 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 ATXN3LQ9H3M9 355 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 SEMA6BQ9H3T3 888 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 GSX1Q9H4S2 264 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-208ENST00000538266 PIDD1Q9HB75 910 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 PICK1Q9NRD5 415 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 ZNF277Q9NRM2 450 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-208ENST00000538266 NOP58Q9Y2X3 529 aaKnown RBP5.25□□□□□ -1.57
SNHG1-208ENST00000538266 PCDHGC5Q9Y5F6 944 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 LTBP1Q14766 1721 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 DUOX1Q9NRD9 1551 aa5.25□□□□□ -1.57
SNHG1-208ENST00000538266 A0A1B0GUL6 1792 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 ZNF609O15014 1411 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 HMX2A2RU54 273 aa5.24□□□□□ -1.57
SNHG1-208ENST00000538266 FRAT2O75474 233 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-208ENST00000538266 IFIT2P09913 472 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms