RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MYO3AQ8NEV4 1616 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 MMP1P03956 469 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 ZNF75DP51815 510 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 HMGCS2P54868 508 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 ITPK1Q13572 414 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 RSRC2Q7L4I2 434 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 CCDC105Q8IYK2 499 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 SYCE1Q8N0S2 351 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 RNF146Q9NTX7 359 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 MTMR6Q9Y217 621 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 FER1L4A9Z1Z3 1794 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 DENND3A2RUS2 1198 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 PRPF3O43395 683 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 XRCC6P12956 609 aaKnown RBP eCLIP5.87□□□□□ -1.47
LRP6-203ENST00000538239 GCFC2P16383 781 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 PTPREP23469 700 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 GTF2F1P35269 517 aaKnown RBP eCLIP5.87□□□□□ -1.47
LRP6-203ENST00000538239 PPP2R3AQ06190 1150 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 SKIV2LQ15477 1246 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 SLC15A2Q16348 729 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 DSTYKQ6XUX3 929 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 TBC1D10CQ8IV04 446 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 SMC1BQ8NDV3 1235 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.87□□□□□ -1.47
LRP6-203ENST00000538239 GOLGA8IPA6NC78 632 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 GOLGA8JA6NMD2 632 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 TNPO2O14787 897 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 CELF2O95319 508 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 GNAT1P11488 350 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 GAP43P17677 238 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 ELF1P32519 619 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 HADHQ16836 314 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 C8orf74Q6P047 294 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 CCDC84Q86UT8 332 aaPredicted RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 TRMT2AQ8IZ69 625 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 SLC17A8Q8NDX2 589 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 NSUN7Q8NE18 718 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 ZNF668Q96K58 619 aaPredicted RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 FAM84BQ96KN1 310 aaPredicted RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 TRIM7Q9C029 511 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 PFDN4Q9NQP4 134 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 RGS12O14924 1447 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 SFI1A8K8P3 1242 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 BUB1O43683 1085 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 ANXA13P27216 316 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 BFSP1Q12934 665 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 CATSPER4Q7RTX7 472 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 NOP9Q86U38 636 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 CEP57Q86XR8 500 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 SMYD4Q8IYR2 804 aaPredicted RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 GRAMD1CQ8IYS0 662 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 GABPB2Q8TAK5 448 aaPredicted RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.87□□□□□ -1.47
LRP6-203ENST00000538239 STAG1Q8WVM7 1258 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 ATRIPQ8WXE1 791 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 AIFM3Q96NN9 605 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 GCNAQ96QF7 691 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 TMEM47Q9BQJ4 181 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 IFIH1Q9BYX4 1025 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 RPF1Q9H9Y2 349 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 GGA3Q9NZ52 723 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 NEXMIFQ5QGS0 1516 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 TYW5A2RUC4 315 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 CMA1P23946 247 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 LONRF2Q1L5Z9 754 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 FASTKD5Q7L8L6 764 aaKnown RBP5.87□□□□□ -1.47
LRP6-203ENST00000538239 KIAA1468Q9P260 1216 aa5.87□□□□□ -1.47
LRP6-203ENST00000538239 CAMTA2O94983 1202 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 PSMC2P35998 433 aaKnown RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 GMPSP49915 693 aaPredicted RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 RPS6KA1Q15418 735 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 TAF1CQ15572 869 aaPredicted RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 RCSD1Q6JBY9 416 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 CYB5R4Q7L1T6 521 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 CRAMP1Q96RY5 1269 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 FBXO40Q9UH90 709 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 ZBTB5O15062 677 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 NR2F2P24468 414 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 MAN1A1P33908 653 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 MFAP3P55082 362 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 PIGOQ8TEQ8 1089 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 DCP1AQ9NPI6 582 aaPredicted RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 GOLGA6CA6NDK9 693 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 GOLGA6BA6NDN3 693 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 PLA2G4BP0C869 781 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 GOLGA6DP0CG33 693 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 CD58P19256 250 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 TTLL4Q14679 1199 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 PHLDB2Q86SQ0 1253 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 TMTC1Q8IUR5 882 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 FBXO18Q8NFZ0 1043 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 CNOT6LQ96LI5 555 aaKnown RBP5.86□□□□□ -1.47
LRP6-203ENST00000538239 GOLGA6AQ9NYA3 693 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 AMFRQ9UKV5 643 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 KCNH4Q9UQ05 1017 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 LRRC7Q96NW7 1537 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 A6NJR5 290 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP17L15C9J2P7 530 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP17L13C9JLJ4 530 aa5.86□□□□□ -1.47
LRP6-203ENST00000538239 USP17L11C9JVI0 530 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms