RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 OGFOD1Q8N543 542 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 P2RX7Q99572 595 aaKnown RBP12.05□□□□□ -0.48
CLIP1-210ENST00000538120 PCDHA1Q9Y5I3 950 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 SYNRGQ9UMZ2 1314 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L15C9J2P7 530 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L13C9JLJ4 530 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L11C9JVI0 530 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L18D6R9N7 530 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L22D6RA61 530 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L17D6RBQ6 530 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L19D6RCP7 530 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L20D6RJB6 530 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 COBLO75128 1261 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 ECE1P42892 770 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L24Q0WX57 530 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 FKBP1CQ5VVH2 108 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 USP17L6PQ6QN14 398 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 BTNL9Q6UXG8 535 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 ACER1Q8TDN7 264 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 TMEM39BQ9GZU3 492 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 DNAI1Q9UI46 699 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 GDAQ9Y2T3 454 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 SHTN1A0MZ66 631 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 BMP3P12645 472 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 NR1I3Q14994 352 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 ARHGAP29Q52LW3 1261 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 SYDE2Q5VT97 1194 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 CCDC150Q8NCX0 1101 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 HAS1Q92839 578 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 PNMA5Q96PV4 448 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 CUEDC2Q9H467 287 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 RMND1Q9NWS8 449 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 SYNPO2Q9UMS6 1093 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 CTNND2Q9UQB3 1225 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.04□□□□□ -0.488e-8■■■□□ 15.7
CLIP1-210ENST00000538120 FHOD1Q9Y613 1164 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 PSDA5PKW4 1024 aaPredicted RBP12.04□□□□□ -0.48
CLIP1-210ENST00000538120 KIF2AO00139 706 aaPredicted RBP12.04□□□□□ -0.48
CLIP1-210ENST00000538120 MEIS2O14770 477 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 TBX2Q13207 712 aaPredicted RBP12.04□□□□□ -0.48
CLIP1-210ENST00000538120 GRB10Q13322 594 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 KCNB1Q14721 858 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 RASSF8Q8NHQ8 419 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 VEZTQ9HBM0 779 aa12.04□□□□□ -0.48
CLIP1-210ENST00000538120 NFKBIEO00221 500 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 MYL1P05976 194 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 TAL1P17542 331 aaPredicted RBP12.03□□□□□ -0.48
CLIP1-210ENST00000538120 PRCPP42785 496 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 NBPF9Q3BBW0 867 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 DALRD3Q5D0E6 543 aaKnown RBP12.03□□□□□ -0.48
CLIP1-210ENST00000538120 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 EPC1Q9H2F5 836 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 MAGEF1Q9HAY2 307 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 EMILIN3Q9NT22 766 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 ZBTB21Q9ULJ3 1066 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 A0A1B0GTH6 734 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 WNT10BO00744 389 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 MAFGO15525 162 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 TBC1D12O60347 775 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 MMP14P50281 582 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 PDIA5Q14554 519 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 TRIM65Q6PJ69 517 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 FAM83AQ86UY5 434 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 SPICE1Q8N0Z3 855 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 ADSSL1Q8N142 457 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 CRYGNQ8WXF5 182 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 GJA10Q969M2 543 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 C7orf25Q9BPX7 421 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 AMNQ9BXJ7 453 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 GLT8D2Q9H1C3 349 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 BLOC1S4Q9NUP1 217 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.03□□□□□ -0.48
CLIP1-210ENST00000538120 LRWD1Q9UFC0 647 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 DDX25Q9UHL0 483 aaKnown RBP12.03□□□□□ -0.48
CLIP1-210ENST00000538120 TMX2Q9Y320 296 aa12.03□□□□□ -0.48
CLIP1-210ENST00000538120 OPLAHO14841 1288 aa12.02□□□□□ -0.48
CLIP1-210ENST00000538120 RHOBTB3O94955 611 aa12.02□□□□□ -0.48
CLIP1-210ENST00000538120 MAP3K10Q02779 954 aa12.02□□□□□ -0.48
CLIP1-210ENST00000538120 CIAPIN1Q6FI81 312 aa12.02□□□□□ -0.48
CLIP1-210ENST00000538120 NELFBQ8WX92 580 aa12.02□□□□□ -0.48
CLIP1-210ENST00000538120 TRIM9Q9C026 710 aa12.02□□□□□ -0.48
CLIP1-210ENST00000538120 TMX1Q9H3N1 280 aa12.02□□□□□ -0.48
CLIP1-210ENST00000538120 POTEMA6NI47 508 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 TEX33O43247 280 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 ETF1P62495 437 aaKnown RBP12.02□□□□□ -0.49
CLIP1-210ENST00000538120 MIGA2Q7L4E1 593 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 FBXO11Q86XK2 927 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 GIMAP8Q8ND71 665 aaPredicted RBP12.02□□□□□ -0.49
CLIP1-210ENST00000538120 MBOAT7Q96N66 472 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 ANO3Q9BYT9 981 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 MTFR1LQ9H019 292 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 PRR12Q9ULL5 1215 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 MAPK8IP1Q9UQF2 711 aa12.02□□□□□ -0.49
CLIP1-210ENST00000538120 CYP3A7-CYP3A51PA0A087WV96 503 aa12.01□□□□□ -0.49
CLIP1-210ENST00000538120 LOC102724159A0A0B4J2E5 919 aa12.01□□□□□ -0.49
CLIP1-210ENST00000538120 GCFC2P16383 781 aaKnown RBP12.01□□□□□ -0.49
CLIP1-210ENST00000538120 CYP3A7P24462 503 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms