RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 MB21D2Q8IYB1 491 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 LUC7L2Q9Y383 392 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 RCCD1A6NED2 376 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 NEFHP12036 1026 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 PDE6AP16499 860 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 GPSM2P81274 684 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 PPARAQ07869 468 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 PAK2Q13177 524 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 TRIM29Q14134 588 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 WDR59Q6PJI9 974 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 SLC30A9Q6PML9 568 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 MFN1Q8IWA4 741 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 APPBP2Q92624 585 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 L3MBTL3Q96JM7 780 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 ZNF570Q96NI8 536 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 GSDMAQ96QA5 445 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 TMBIM4Q9HC24 238 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 NOP53Q9NZM5 478 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 ZNF532Q9HCE3 1301 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 SRGNP10124 158 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 MRPS25P82663 173 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 PPP1R7Q15435 360 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 C8orf74Q6P047 294 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 TSGA10Q9BZW7 698 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 TAB2Q9NYJ8 693 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 SLC12A6Q9UHW9 1150 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 XDHP47989 1333 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 WDR19Q8NEZ3 1342 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 A6NHS1 94 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 FOXP2O15409 715 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 RBM5P52756 815 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 PSMD2Q13200 908 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 BLMHQ13867 455 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 MEA1Q16626 185 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 TCP11X2Q5H9J9 407 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 GKAP1Q5VSY0 366 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 FBXO33Q7Z6M2 555 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 MAGEB6Q8N7X4 407 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 YIPF3Q9GZM5 350 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 ABCF2Q9UG63 623 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 CAPN11Q9UMQ6 739 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 PCDHGC5Q9Y5F6 944 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 SRPRBQ9Y5M8 271 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 COL11A2P13942 1736 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 IRS2Q9Y4H2 1338 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 DOCK2Q92608 1830 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 GOLGA6L10A6NI86 522 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 GSTA1P08263 222 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 FAM153BP0C7A2 387 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 TCP1P17987 556 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 HIBADHP31937 336 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 HPDP32754 393 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 PDE6BP35913 854 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 ANTXR2P58335 489 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 UBXN1Q04323 297 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 FAM153CQ494X1 144 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 CWF19L1Q69YN2 538 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 SH3RF1Q7Z6J0 888 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 CCDC170Q8IYT3 715 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 FAM153AQ9UHL3 310 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 CTNND2Q9UQB3 1225 aa12.52□□□□□ -0.41
SEMA4D-221ENST00000537934 TCRBV5S4A2TA0A5A2 114 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 GPAA1O43292 621 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 ATP2C2O75185 946 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 PAEPP09466 180 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 CARSP49589 748 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 KIF5AQ12840 1032 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 NOSTRINQ8IVI9 506 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 CRAMP1Q96RY5 1269 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 SLC5A4Q9NY91 659 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 NFU1Q9UMS0 254 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 RPS6KL1Q9Y6S9 549 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 DUSP10Q9Y6W6 482 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 MACROD2A1Z1Q3 448 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 LINGO3P0C6S8 592 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 FERP16591 822 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 PAFAH1B1P43034 410 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 TOB1P50616 345 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 PAPOLAP51003 745 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 KCNJ12Q14500 433 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 LRIG3Q6UXM1 1119 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 CCDC63Q8NA47 563 aa12.51□□□□□ -0.41
SEMA4D-221ENST00000537934 KLHL23Q8NBE8 558 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms