RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 COPS5Q92905 334 aa11.52□□□□□ -0.57
CPSF7-217ENST00000537162 WDR11Q9BZH6 1224 aa11.52□□□□□ -0.57
CPSF7-217ENST00000537162 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
CPSF7-217ENST00000537162 PARNO95453 639 aaKnown RBP11.51□□□□□ -0.57
CPSF7-217ENST00000537162 RB1P06400 928 aa11.51□□□□□ -0.57
CPSF7-217ENST00000537162 ASGR2P07307 311 aa11.51□□□□□ -0.57
CPSF7-217ENST00000537162 ZAP70P43403 619 aa11.51□□□□□ -0.57
CPSF7-217ENST00000537162 FIBCD1Q8N539 461 aa11.51□□□□□ -0.57
CPSF7-217ENST00000537162 APOL5Q9BWW9 433 aa11.51□□□□□ -0.57
CPSF7-217ENST00000537162 SLC38A10Q9HBR0 1119 aa11.51□□□□□ -0.57
CPSF7-217ENST00000537162 PLXNA4Q9HCM2 1894 aa11.51□□□□□ -0.57
CPSF7-217ENST00000537162 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 USP17L21D6R901 530 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 UQCRFS1P1P0C7P4 283 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 DMWDQ09019 674 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 PPM1JQ5JR12 505 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 KIFC2Q96AC6 838 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 S1PR5Q9H228 398 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 VTA1Q9NP79 307 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 MCM9Q9NXL9 1143 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 CDV3Q9UKY7 258 aaKnown RBP11.5□□□□□ -0.57
CPSF7-217ENST00000537162 PLAGL2Q9UPG8 496 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 MAST4O15021 2626 aa11.5□□□□□ -0.57
CPSF7-217ENST00000537162 A6NJR5 290 aa11.49□□□□□ -0.57
CPSF7-217ENST00000537162 C2CD4DB7Z1M9 353 aa11.49□□□□□ -0.57
CPSF7-217ENST00000537162 PER2O15055 1255 aa11.49□□□□□ -0.57
CPSF7-217ENST00000537162 ZBED4O75132 1171 aa11.49□□□□□ -0.57
CPSF7-217ENST00000537162 ZNF200P98182 395 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-217ENST00000537162 PLEKHG4Q58EX7 1191 aa11.49□□□□□ -0.57
CPSF7-217ENST00000537162 PRPF38AQ8NAV1 312 aaKnown RBP11.49□□□□□ -0.57
CPSF7-217ENST00000537162 ATP8B4Q8TF62 1192 aa11.49□□□□□ -0.57
CPSF7-217ENST00000537162 IL17RAQ96F46 866 aa11.49□□□□□ -0.57
CPSF7-217ENST00000537162 IFIH1Q9BYX4 1025 aaKnown RBP11.49□□□□□ -0.57
CPSF7-217ENST00000537162 GOPCQ9HD26 462 aa11.49□□□□□ -0.57
CPSF7-217ENST00000537162 ITGB1P05556 798 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 SDHBP21912 280 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 HIC1Q14526 733 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 SESTD1Q86VW0 696 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 SPPL3Q8TCT6 385 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 MORC4Q8TE76 937 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 KAT2BQ92831 832 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 CLP1Q92989 425 aaKnown RBP11.48□□□□□ -0.57
CPSF7-217ENST00000537162 RIOK1Q9BRS2 568 aaKnown RBP11.48□□□□□ -0.57
CPSF7-217ENST00000537162 RTKNQ9BST9 563 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 ACAD9Q9H845 621 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 HDAC6Q9UBN7 1215 aa11.48□□□□□ -0.57
CPSF7-217ENST00000537162 GREB1LQ9C091 1923 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-217ENST00000537162 BAZ2AQ9UIF9 1905 aaKnown RBP11.47□□□□□ -0.57
CPSF7-217ENST00000537162 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
CPSF7-217ENST00000537162 MUM1L1Q5H9M0 696 aa11.47□□□□□ -0.57
CPSF7-217ENST00000537162 CCER1Q8TC90 406 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-217ENST00000537162 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.47□□□□□ -0.57
CPSF7-217ENST00000537162 RC3H2Q9HBD1 1191 aaKnown RBP11.47□□□□□ -0.57
CPSF7-217ENST00000537162 RNF146Q9NTX7 359 aa11.47□□□□□ -0.57
CPSF7-217ENST00000537162 GTF2IRD1Q9UHL9 959 aa11.47□□□□□ -0.57
CPSF7-217ENST00000537162 ADGRA3Q8IWK6 1321 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 CYP2D7A0A087X1C5 515 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 KPNA6O60684 536 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 IDH1O75874 414 aaKnown RBP11.46□□□□□ -0.57
CPSF7-217ENST00000537162 NDUFB10O96000 172 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-217ENST00000537162 SP9P0CG40 484 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 TTC39AQ5SRH9 613 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 SYCE2Q6PIF2 218 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 MRPL50Q8N5N7 158 aaKnown RBP11.46□□□□□ -0.57
CPSF7-217ENST00000537162 SDR42E1Q8WUS8 393 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 ERVK-5Q9HDB9 667 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 CYP39A1Q9NYL5 469 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 ZMIZ1Q9ULJ6 1067 aa11.46□□□□□ -0.57
CPSF7-217ENST00000537162 CTDP1Q9Y5B0 961 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-217ENST00000537162 UNC79Q9P2D8 2635 aa11.46□□□□□ -0.58
CPSF7-217ENST00000537162 F5H6K3 240 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 TGM1P22735 817 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 CDK8P49336 464 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 KLRC3Q07444 240 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 PTK7Q13308 1070 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
CPSF7-217ENST00000537162 POF1BQ8WVV4 589 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 PPP2R3CQ969Q6 453 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 DBNDD2Q9BQY9 259 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 POMKQ9H5K3 350 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 TLE6Q9H808 572 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 KANSL2Q9H9L4 492 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 NCDNQ9UBB6 729 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 SWAP70Q9UH65 585 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 ANGPTL2Q9UKU9 493 aa11.45□□□□□ -0.58
CPSF7-217ENST00000537162 ARIH2O95376 493 aa11.44□□□□□ -0.58
CPSF7-217ENST00000537162 PROS1P07225 676 aa11.44□□□□□ -0.58
CPSF7-217ENST00000537162 OAZ1P54368 228 aa11.44□□□□□ -0.58
CPSF7-217ENST00000537162 SNAP25P60880 206 aa11.44□□□□□ -0.58
CPSF7-217ENST00000537162 BRDTQ58F21 947 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-217ENST00000537162 KLHL23Q8NBE8 558 aa11.44□□□□□ -0.58
CPSF7-217ENST00000537162 RTP3Q9BQQ7 232 aa11.44□□□□□ -0.58
CPSF7-217ENST00000537162 ANTXR1Q9H6X2 564 aa11.44□□□□□ -0.58
CPSF7-217ENST00000537162 PARD6AQ9NPB6 346 aa11.44□□□□□ -0.58
CPSF7-217ENST00000537162 DCP1AQ9NPI6 582 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-217ENST00000537162 LIMD1Q9UGP4 676 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms