RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 ASTN2O75129 1339 aaPredicted RBP23.88■■□□□ 1.41
TRIM3-214ENST00000536344 TNNI2P48788 182 aa23.88■■□□□ 1.41
TRIM3-214ENST00000536344 RASSF8Q8NHQ8 419 aa23.88■■□□□ 1.41
TRIM3-214ENST00000536344 CCDC175P0C221 793 aa23.88■■□□□ 1.41
TRIM3-214ENST00000536344 DNAJC21Q5F1R6 531 aaKnown RBP23.88■■□□□ 1.41
TRIM3-214ENST00000536344 SLC35F6Q8N357 371 aa23.88■■□□□ 1.41
TRIM3-214ENST00000536344 NLGN2Q8NFZ4 835 aa23.88■■□□□ 1.41
TRIM3-214ENST00000536344 SAMSN1Q9NSI8 373 aaKnown RBP23.88■■□□□ 1.41
TRIM3-214ENST00000536344 NFE2L3Q9Y4A8 694 aa23.88■■□□□ 1.41
TRIM3-214ENST00000536344 ADGRG1Q9Y653 693 aa23.88■■□□□ 1.41
TRIM3-214ENST00000536344 ENTPD3O75355 529 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 GNA11P29992 359 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 TRAPPC10P48553 1259 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 NONOQ15233 471 aaKnown RBP eCLIP23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USH1GQ495M9 461 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 CEP112Q8N8E3 955 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 SMCHD1A6NHR9 2005 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L15C9J2P7 530 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L13C9JLJ4 530 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L11C9JVI0 530 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L18D6R9N7 530 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L22D6RA61 530 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L17D6RBQ6 530 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L19D6RCP7 530 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L20D6RJB6 530 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 WNT10BO00744 389 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 TEX33O43247 280 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 CPP00450 1065 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L24Q0WX57 530 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 NCAPH2Q6IBW4 605 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 USP17L6PQ6QN14 398 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 TMEM179Q6ZVK1 233 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 CNTNAP1P78357 1384 aa23.87■■□□□ 1.41
TRIM3-214ENST00000536344 NDUFB10O96000 172 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 SAMD7Q7Z3H4 446 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 PAGE5Q96GU1 130 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 MYO3BQ8WXR4 1341 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 ADCY7P51828 1080 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 TGFB2P61812 414 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 QRICH1Q2TAL8 776 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 KIAA1755Q5JYT7 1200 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 CIAPIN1Q6FI81 312 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 KLHL10Q6JEL2 608 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 POTEDQ86YR6 584 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 DAGLBQ8NCG7 672 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 MED15Q96RN5 788 aa23.86■■□□□ 1.41
TRIM3-214ENST00000536344 PNMA6FA0A0J9YX94 578 aa23.85■■□□□ 1.41
TRIM3-214ENST00000536344 TDP2O95551 362 aa23.85■■□□□ 1.41
TRIM3-214ENST00000536344 PRELPP51888 382 aa23.85■■□□□ 1.41
TRIM3-214ENST00000536344 DTHD1Q6ZMT9 781 aa23.85■■□□□ 1.41
TRIM3-214ENST00000536344 A0A087WUV0 522 aaPredicted RBP23.85■■□□□ 1.41
TRIM3-214ENST00000536344 BMP15O95972 392 aa23.85■■□□□ 1.41
TRIM3-214ENST00000536344 CCT5P48643 541 aa23.85■■□□□ 1.41
TRIM3-214ENST00000536344 KCNV1Q6PIU1 500 aa23.85■■□□□ 1.41
TRIM3-214ENST00000536344 IGSF22Q8N9C0 903 aa23.85■■□□□ 1.41
TRIM3-214ENST00000536344 AFAP1L1Q8TED9 768 aa23.85■■□□□ 1.41
TRIM3-214ENST00000536344 GLIS2Q9BZE0 524 aaPredicted RBP23.85■■□□□ 1.41
TRIM3-214ENST00000536344 PRPF6O94906 941 aaKnown RBP23.84■■□□□ 1.41
TRIM3-214ENST00000536344 SPDYE2Q495Y8 402 aa23.84■■□□□ 1.41
TRIM3-214ENST00000536344 ACRBPQ8NEB7 543 aa23.84■■□□□ 1.41
TRIM3-214ENST00000536344 ZBTB5O15062 677 aa23.84■■□□□ 1.41
TRIM3-214ENST00000536344 KIF5CO60282 957 aa23.84■■□□□ 1.41
TRIM3-214ENST00000536344 TECP42680 631 aa23.84■■□□□ 1.41
TRIM3-214ENST00000536344 MNAT1P51948 309 aa23.84■■□□□ 1.41
TRIM3-214ENST00000536344 GSCP56915 257 aaPredicted RBP23.84■■□□□ 1.41
TRIM3-214ENST00000536344 GPATCH4Q5T3I0 446 aaKnown RBP23.84■■□□□ 1.41
TRIM3-214ENST00000536344 MTRQ99707 1265 aa23.84■■□□□ 1.41
TRIM3-214ENST00000536344 HINFPQ9BQA5 517 aa23.84■■□□□ 1.41
TRIM3-214ENST00000536344 NYAP2Q9P242 653 aa23.84■■□□□ 1.41
TRIM3-214ENST00000536344 ZMYND10O75800 440 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 ERLIN2O94905 339 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 TBC1D10BQ4KMP7 808 aaPredicted RBP23.83■■□□□ 1.41
TRIM3-214ENST00000536344 SWT1Q5T5J6 900 aaKnown RBP23.83■■□□□ 1.41
TRIM3-214ENST00000536344 CCDC91Q7Z6B0 441 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 NEK8Q86SG6 692 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 TXKP42681 527 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 STX17P56962 302 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 CDC37Q16543 378 aaPredicted RBP23.83■■□□□ 1.41
TRIM3-214ENST00000536344 KRT25Q7Z3Z0 450 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 MYOZ2Q9NPC6 264 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 FZD1Q9UP38 647 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 PCDHA1Q9Y5I3 950 aa23.83■■□□□ 1.41
TRIM3-214ENST00000536344 SLC37A4O43826 429 aa23.83■■□□□ 1.4
TRIM3-214ENST00000536344 HNRNPH1P31943 449 aaKnown RBP23.83■■□□□ 1.4
TRIM3-214ENST00000536344 PRAMEF18Q5VWM3 479 aa23.83■■□□□ 1.4
TRIM3-214ENST00000536344 GALNT17Q6IS24 598 aa23.83■■□□□ 1.4
TRIM3-214ENST00000536344 FAM151AQ8WW52 585 aa23.83■■□□□ 1.4
TRIM3-214ENST00000536344 ATRNL1Q5VV63 1379 aa23.82■■□□□ 1.4
TRIM3-214ENST00000536344 GREB1LQ9C091 1923 aaPredicted RBP23.82■■□□□ 1.4
TRIM3-214ENST00000536344 RBL2Q08999 1139 aa23.82■■□□□ 1.4
TRIM3-214ENST00000536344 CUL4BQ13620 913 aa23.82■■□□□ 1.4
TRIM3-214ENST00000536344 GSPT2Q8IYD1 628 aaKnown RBP23.82■■□□□ 1.4
TRIM3-214ENST00000536344 HOOK1Q9UJC3 728 aaKnown RBP23.82■■□□□ 1.4
TRIM3-214ENST00000536344 EDIL3O43854 480 aa23.82■■□□□ 1.4
TRIM3-214ENST00000536344 CCDC172P0C7W6 258 aa23.82■■□□□ 1.4
TRIM3-214ENST00000536344 DGKZQ13574 1117 aa23.82■■□□□ 1.4
TRIM3-214ENST00000536344 LRRC15Q8TF66 581 aa23.82■■□□□ 1.4
TRIM3-214ENST00000536344 MAPK8IP1Q9UQF2 711 aa23.82■■□□□ 1.4
TRIM3-214ENST00000536344 CTAGE15A4D2H0 777 aa23.81■■□□□ 1.4
TRIM3-214ENST00000536344 CTAGE9A4FU28 777 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms