RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TAL1P17542 331 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-202ENST00000535906 USP11P51784 963 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 ERVK-24P63145 666 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 IKQ13123 557 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-202ENST00000535906 TRIM14Q14142 442 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 USH1GQ495M9 461 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 RSBN1LQ6PCB5 846 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-202ENST00000535906 POTEAQ6S8J7 498 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 SPICE1Q8N0Z3 855 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 TTLL6Q8N841 843 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 NOC3LQ8WTT2 800 aaKnown RBP14.93□□□□□ -0.02
VPS33B-202ENST00000535906 DDX12PQ92771 950 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 TUBGCP2Q9BSJ2 902 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 AMNQ9BXJ7 453 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS33B-202ENST00000535906 PSME4Q14997 1843 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 B4DLN1 442 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 NKRFO15226 690 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS33B-202ENST00000535906 BMP3P12645 472 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 KRT9P35527 623 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 CLCN6P51797 869 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 SYDE2Q5VT97 1194 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 IRX2Q9BZI1 471 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-202ENST00000535906 KCNMB3Q9NPA1 279 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 ZBTB12Q9Y330 459 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-202ENST00000535906 MRFAP1Q9Y605 127 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 A0A1W2PQC6 194 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 TTC26A0AVF1 554 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 IDEP14735 1019 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 PPP1R2P41236 205 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 ECE1P42892 770 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 CENPPQ6IPU0 288 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 FBXO11Q86XK2 927 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 CRYGNQ8WXF5 182 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 CNOT6LQ96LI5 555 aaKnown RBP14.92□□□□□ -0.02
VPS33B-202ENST00000535906 GMLQ99445 158 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 LZTFL1Q9NQ48 299 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 ZNF277Q9NRM2 450 aaPredicted RBP14.92□□□□□ -0.02
VPS33B-202ENST00000535906 COL2A1P02458 1487 aaPredicted RBP14.92□□□□□ -0.02
VPS33B-202ENST00000535906 COL4A5P29400 1685 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 CYP3A7-CYP3A51PA0A087WV96 503 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 VIL1P09327 827 aaKnown RBP14.92□□□□□ -0.02
VPS33B-202ENST00000535906 CYP3A7P24462 503 aa14.92□□□□□ -0.02
VPS33B-202ENST00000535906 GABPB1Q06547 395 aaPredicted RBP14.92□□□□□ -0.02
VPS33B-202ENST00000535906 NAP1L4Q99733 375 aaKnown RBP14.92□□□□□ -0.02
VPS33B-202ENST00000535906 HERC5Q9UII4 1024 aaKnown RBP14.92□□□□□ -0.02
VPS33B-202ENST00000535906 SMCHD1A6NHR9 2005 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 KCNA3P22001 575 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 DNM2P50570 870 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 ARHGAP4P98171 946 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 EHHADHQ08426 723 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 AP3B2Q13367 1082 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 KIAA1755Q5JYT7 1200 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 TMTC1Q8IUR5 882 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 RTKN2Q8IZC4 609 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 LARGE2Q8N3Y3 721 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 GLIS3Q8NEA6 775 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 MBOAT7Q96N66 472 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 ARGLU1Q9NWB6 273 aaPredicted RBP14.91□□□□□ -0.02
VPS33B-202ENST00000535906 TMOD2Q9NZR1 351 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 ZNF70Q9UC06 446 aaPredicted RBP14.91□□□□□ -0.02
VPS33B-202ENST00000535906 OPLAHO14841 1288 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 BMS1Q14692 1282 aaKnown RBP14.91□□□□□ -0.02
VPS33B-202ENST00000535906 DLGAP5Q15398 846 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 MIIPQ5JXC2 388 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 HYIQ5T013 277 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 BTNL9Q6UXG8 535 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 ACRBPQ8NEB7 543 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 DNAJC19Q96DA6 116 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 PSMD1Q99460 953 aa14.91□□□□□ -0.02
VPS33B-202ENST00000535906 STAT3P40763 770 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 CYP26C1Q6V0L0 522 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 ACER1Q8TDN7 264 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 CHP1Q99653 195 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 PRR12Q9ULL5 1215 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 KIAA1024Q9UPX6 916 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 RASSF10A6NK89 507 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 E9PMD0 336 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 DPEP1P16444 411 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 MTIF2P46199 727 aaKnown RBP14.9□□□□□ -0.02
VPS33B-202ENST00000535906 KLK7P49862 253 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 PPP2R3AQ06190 1150 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 TBC1D8BQ0IIM8 1120 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 PRR16Q569H4 304 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 FAM114A1Q8IWE2 563 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 CDAN1Q8IWY9 1227 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 GUF1Q8N442 669 aaKnown RBP14.9□□□□□ -0.02
VPS33B-202ENST00000535906 FAM151AQ8WW52 585 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 LRRC27Q9C0I9 530 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 NT5C3AQ9H0P0 336 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 CAPN11Q9UMQ6 739 aa14.9□□□□□ -0.02
VPS33B-202ENST00000535906 LUC7L2Q9Y383 392 aaKnown RBP14.9□□□□□ -0.02
VPS33B-202ENST00000535906 CNTNAP1P78357 1384 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 POTEB3A0JP26 581 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 POTECB2RU33 542 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 ABL1P00519 1130 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 HOXA13P31271 388 aaPredicted RBP14.89□□□□□ -0.03
VPS33B-202ENST00000535906 MMP14P50281 582 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 LRRC41Q15345 812 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 GRIPAP1Q4V328 841 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms