RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 LBHD1Q9BQE6 289 aaPredicted RBP10.27□□□□□ -0.77
CHD4-204ENST00000535810 MYL10Q9BUA6 226 aa10.27□□□□□ -0.77
CHD4-204ENST00000535810 WDR11Q9BZH6 1224 aa10.27□□□□□ -0.77
CHD4-204ENST00000535810 RIOX1Q9H6W3 641 aa10.27□□□□□ -0.77
CHD4-204ENST00000535810 Q9Y3F1 56 aa10.27□□□□□ -0.77
CHD4-204ENST00000535810 CDH23Q9H251 3354 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 A0A0U1RQG5 324 aaPredicted RBP10.26□□□□□ -0.77
CHD4-204ENST00000535810 C2orf72A6NCS6 295 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 KIAA0355O15063 1070 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 DYNC1LI2O43237 492 aaPredicted RBP10.26□□□□□ -0.77
CHD4-204ENST00000535810 ITGB8P26012 769 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 HSD17B4P51659 736 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 FAAP100Q0VG06 881 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 PPP2R5BQ15173 497 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 CXCL17Q6UXB2 119 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 NSUN6Q8TEA1 469 aaKnown RBP10.26□□□□□ -0.77
CHD4-204ENST00000535810 SCFD2Q8WU76 684 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 TMEM87BQ96K49 555 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 TAAR1Q96RJ0 339 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 MAP3K14Q99558 947 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 AP5M1Q9H0R1 490 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 PCDHA1Q9Y5I3 950 aa10.26□□□□□ -0.77
CHD4-204ENST00000535810 PNMA6FA0A0J9YX94 578 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 B4DLN1 442 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 ARVCFO00192 962 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 CABYRO75952 493 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 ARIH2O95376 493 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 CFBP00751 764 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 KIF5BP33176 963 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 LIFRP42702 1097 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 CDK7P50613 346 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 MRPL12P52815 198 aaKnown RBP10.25□□□□□ -0.77
CHD4-204ENST00000535810 CAMK2BQ13554 666 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 NFXL1Q6ZNB6 911 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 TMTC2Q8N394 836 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 CTCFLQ8NI51 663 aaPredicted RBP10.25□□□□□ -0.77
CHD4-204ENST00000535810 BADQ92934 168 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 VTI1AQ96AJ9 217 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 RMDN3Q96TC7 470 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 SPZ1Q9BXG8 430 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 LRRC2Q9BYS8 371 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 TBX21Q9UL17 535 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 MROH7Q68CQ1 1323 aa10.25□□□□□ -0.77
CHD4-204ENST00000535810 CCDC69A6NI79 296 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 DCDC2CA8MYV0 355 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 NKRFO15226 690 aaKnown RBP eCLIP10.24□□□□□ -0.77
CHD4-204ENST00000535810 ZEB2O60315 1214 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 PLEKHA8P1O95397 391 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 EIF2AK2P19525 551 aaKnown RBP10.24□□□□□ -0.77
CHD4-204ENST00000535810 RXRAP19793 462 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 HOXA13P31271 388 aaPredicted RBP10.24□□□□□ -0.77
CHD4-204ENST00000535810 TRAF1Q13077 416 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 TTLL4Q14679 1199 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 TSGA10IPQ3SY00 556 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 ARHGEF16Q5VV41 709 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 SGMS1Q86VZ5 419 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 FAM126BQ8IXS8 530 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 SLC43A3Q8NBI5 491 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 OR6J1Q8NGC5 347 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 NEK1Q96PY6 1258 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 IWS1Q96ST2 819 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 PXMP2Q9NR77 195 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 TMEM39AQ9NV64 488 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 MAP3K20Q9NYL2 800 aaKnown RBP10.24□□□□□ -0.77
CHD4-204ENST00000535810 SLC12A7Q9Y666 1083 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 GRIN2DO15399 1336 aa10.24□□□□□ -0.77
CHD4-204ENST00000535810 NR3C2P08235 984 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 CALM1P0DP23 149 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 CALM2P0DP24 149 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 CALM3P0DP25 149 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 TXNP10599 105 aaKnown RBP10.23□□□□□ -0.77
CHD4-204ENST00000535810 RAG1P15918 1043 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 SMARCA1P28370 1054 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 PLA2G5P39877 138 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 CPT1AP50416 773 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 PSMC6P62333 389 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 PURAQ00577 322 aaKnown RBP10.23□□□□□ -0.77
CHD4-204ENST00000535810 ITGA7Q13683 1181 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 STXBP2Q15833 593 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 ADCK5Q3MIX3 580 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 CCDC62Q6P9F0 684 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 TMEM92Q6UXU6 159 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 SEPT14Q6ZU15 432 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 MICU3Q86XE3 530 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 RAB11FIP4Q86YS3 637 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 CMTR1Q8N1G2 835 aaKnown RBP10.23□□□□□ -0.77
CHD4-204ENST00000535810 SRBD1Q8N5C6 995 aaKnown RBP10.23□□□□□ -0.77
CHD4-204ENST00000535810 PIBF1Q8WXW3 757 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 COPS5Q92905 334 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
CHD4-204ENST00000535810 TCEANC2Q96MN5 208 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 LZTS2Q9BRK4 669 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 PDCD2LQ9BRP1 358 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 PPP4R2Q9NY27 417 aa10.23□□□□□ -0.77
CHD4-204ENST00000535810 A6NJR5 290 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
CHD4-204ENST00000535810 EIF3JO75822 258 aaKnown RBP10.22□□□□□ -0.77
CHD4-204ENST00000535810 CD4P01730 458 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 POLR2MP0CAP2 368 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms