RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 RBL2Q08999 1139 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 TC2NQ8N9U0 490 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 GIMAP8Q8ND71 665 aaPredicted RBP20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 ZKSCAN4Q969J2 545 aaPredicted RBP20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 DESI2Q9BSY9 194 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 PKD2L1Q9P0L9 805 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 POLR2AP24928 1970 aaKnown RBP20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 PHF20L1A8MW92 1017 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 CHMP2AO43633 222 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 MED24O75448 989 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 TPM2P07951 284 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 PSMC6P62333 389 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 FAM83AQ86UY5 434 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 RAD54LQ92698 747 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 DDX12PQ92771 950 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 DEFB129Q9H1M3 183 aa20.46■□□□□ 0.87
HTATSF1-204ENST00000535601 RIOK3O14730 519 aaKnown RBP20.45■□□□□ 0.87
HTATSF1-204ENST00000535601 ZNF76P36508 570 aa20.45■□□□□ 0.87
HTATSF1-204ENST00000535601 TNIP1Q15025 636 aa20.45■□□□□ 0.87
HTATSF1-204ENST00000535601 ANKRD40Q6AI12 368 aa20.45■□□□□ 0.87
HTATSF1-204ENST00000535601 LENG9Q96B70 501 aa20.45■□□□□ 0.87
HTATSF1-204ENST00000535601 PTGER2P43116 358 aa20.45■□□□□ 0.86
HTATSF1-204ENST00000535601 BTNL9Q6UXG8 535 aa20.45■□□□□ 0.86
HTATSF1-204ENST00000535601 SGIP1Q9BQI5 828 aa20.45■□□□□ 0.86
HTATSF1-204ENST00000535601 ATAD5Q96QE3 1844 aa20.45■□□□□ 0.86
HTATSF1-204ENST00000535601 TBX2Q13207 712 aaPredicted RBP20.45■□□□□ 0.86
HTATSF1-204ENST00000535601 TCP11X2Q5H9J9 407 aa20.45■□□□□ 0.86
HTATSF1-204ENST00000535601 MTMR14Q8NCE2 650 aa20.45■□□□□ 0.86
HTATSF1-204ENST00000535601 TRPM4Q8TD43 1214 aa20.45■□□□□ 0.86
HTATSF1-204ENST00000535601 ZHX3Q9H4I2 956 aa20.45■□□□□ 0.86
HTATSF1-204ENST00000535601 A0A0U1RQJ8 604 aa20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 TMEM139Q8IV31 216 aa20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 ATRIPQ8WXE1 791 aa20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 C7orf25Q9BPX7 421 aa20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 RAB34Q9BZG1 259 aa20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 KCNMB3Q9NPA1 279 aa20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 COL2A1P02458 1487 aaPredicted RBP20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 COPB1P53618 953 aaKnown RBP20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 PPP1R13BQ96KQ4 1090 aa20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 DUSP9Q99956 384 aaKnown RBP20.44■□□□□ 0.86
HTATSF1-204ENST00000535601 MSH4O15457 936 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 CASP14P31944 242 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 ANGEL2Q5VTE6 544 aaKnown RBP20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 TOGARAM2Q6ZUX3 1019 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 CRYGNQ8WXF5 182 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 TANGO6Q9C0B7 1094 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 ASNSP08243 561 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 FXR1P51114 621 aaKnown RBP eCLIP20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 MTMR2Q13614 643 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 PDIA5Q14554 519 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 KCNB1Q14721 858 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 KIF4BQ2VIQ3 1234 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 LDHDQ86WU2 507 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 ETNPPLQ8TBG4 499 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 PURBQ96QR8 312 aaKnown RBP20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 RGL1Q9NZL6 768 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 CENPFP49454 3210 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 PSMA7O14818 248 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 ZBTB39O15060 712 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 KLK7P49862 253 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 TRMT1LQ7Z2T5 733 aaKnown RBP20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 CSGALNACT2Q8N6G5 542 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 WDR18Q9BV38 432 aa20.43■□□□□ 0.86
HTATSF1-204ENST00000535601 SOWAHDA6NJG2 315 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 PTPN14Q15678 1187 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 TMEM119Q4V9L6 283 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 TTI2Q6NXR4 508 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 ARID3AQ99856 593 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 SEMA6BQ9H3T3 888 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 EML1O00423 815 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 NFIBO00712 420 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 UBXN1Q04323 297 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 PABPC4Q13310 644 aaKnown RBP eCLIP20.42■□□□□ 0.863e-16■■■■■ 35.7
HTATSF1-204ENST00000535601 NAA30Q147X3 362 aaPredicted RBP20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 ARHGAP27Q6ZUM4 889 aa20.42■□□□□ 0.86
HTATSF1-204ENST00000535601 SREBF1P36956 1147 aa20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 USP11P51784 963 aa20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 FKBP1CQ5VVH2 108 aa20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 BAG1Q99933 345 aaPredicted RBP20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 ZMYND15Q9H091 742 aa20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 RAVER2Q9HCJ3 691 aaKnown RBP20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 DDX39AO00148 427 aaKnown RBP20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 GYPCP04921 128 aa20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 GCFC2P16383 781 aaKnown RBP20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 ZNF280AP59817 542 aaPredicted RBP20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 SPIRE1Q08AE8 756 aa20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 AP3B2Q13367 1082 aa20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 CATSPER3Q86XQ3 398 aa20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 CUEDC2Q9H467 287 aa20.41■□□□□ 0.86
HTATSF1-204ENST00000535601 ABCB11O95342 1321 aa20.4■□□□□ 0.86
HTATSF1-204ENST00000535601 B4DLN1 442 aa20.4■□□□□ 0.86
HTATSF1-204ENST00000535601 TBC1D12O60347 775 aa20.4■□□□□ 0.86
HTATSF1-204ENST00000535601 SPP2Q13103 211 aa20.4■□□□□ 0.86
HTATSF1-204ENST00000535601 NELFCDQ8IXH7 590 aa20.4■□□□□ 0.86
HTATSF1-204ENST00000535601 P2RX5Q93086 422 aa20.4■□□□□ 0.86
HTATSF1-204ENST00000535601 HOOK2Q96ED9 719 aa20.4■□□□□ 0.86
HTATSF1-204ENST00000535601 CCPG1Q9ULG6 757 aa20.4■□□□□ 0.86
HTATSF1-204ENST00000535601 EPS15P42566 896 aa20.4■□□□□ 0.86
HTATSF1-204ENST00000535601 AMPD3Q01432 767 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms