RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 HDAC6Q9UBN7 1215 aa18.63■□□□□ 0.57
RPS3-220ENST00000534555 WDR19Q8NEZ3 1342 aa18.63■□□□□ 0.57
RPS3-220ENST00000534555 B4DLN1 442 aa18.62■□□□□ 0.57
RPS3-220ENST00000534555 MX1P20591 662 aa18.62■□□□□ 0.57
RPS3-220ENST00000534555 CASTP20810 708 aaKnown RBP18.62■□□□□ 0.57
RPS3-220ENST00000534555 MRPL12P52815 198 aaKnown RBP18.62■□□□□ 0.57
RPS3-220ENST00000534555 HAND2P61296 217 aa18.62■□□□□ 0.57
RPS3-220ENST00000534555 COL20A1Q9P218 1284 aa18.62■□□□□ 0.57
RPS3-220ENST00000534555 GTF2IRD1Q9UHL9 959 aa18.62■□□□□ 0.57
RPS3-220ENST00000534555 PNMA2Q9UL42 364 aa18.62■□□□□ 0.57
RPS3-220ENST00000534555 SNHG28P0DPA3 235 aa18.61■□□□□ 0.57
RPS3-220ENST00000534555 IL9P15248 144 aa18.61■□□□□ 0.57
RPS3-220ENST00000534555 KCNA5P22460 613 aa18.61■□□□□ 0.57
RPS3-220ENST00000534555 ZNF200P98182 395 aaPredicted RBP18.61■□□□□ 0.57
RPS3-220ENST00000534555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.61■□□□□ 0.571e-24■■□□□ 14.1
RPS3-220ENST00000534555 ALYREFQ86V81 257 aaKnown RBP18.61■□□□□ 0.57
RPS3-220ENST00000534555 WNT8BQ93098 351 aa18.61■□□□□ 0.57
RPS3-220ENST00000534555 FAM227BQ96M60 508 aa18.61■□□□□ 0.57
RPS3-220ENST00000534555 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
RPS3-220ENST00000534555 ABHD14A-ACY1A0A1B0GW23 586 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 PSEN2P49810 448 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 RBL2Q08999 1139 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 LEXMQ3ZCV2 418 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 ZNF618Q5T7W0 954 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 TRAF7Q6Q0C0 670 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 FAM178BQ8IXR5 827 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 GJD3Q8N144 294 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 C7orf31Q8N865 590 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 RGS22Q8NE09 1264 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 SYTL5Q8TDW5 730 aaPredicted RBP18.6■□□□□ 0.57
RPS3-220ENST00000534555 CRBNQ96SW2 442 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 ZKSCAN3Q9BRR0 538 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 C17orf80Q9BSJ5 609 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 HELLSQ9NRZ9 838 aa18.6■□□□□ 0.57
RPS3-220ENST00000534555 SALL3Q9BXA9 1300 aa18.59■□□□□ 0.57
RPS3-220ENST00000534555 SIP14410 1827 aa18.59■□□□□ 0.57
RPS3-220ENST00000534555 BRWD1Q9NSI6 2320 aa18.59■□□□□ 0.57
RPS3-220ENST00000534555 PARNO95453 639 aaKnown RBP18.59■□□□□ 0.57
RPS3-220ENST00000534555 IKBKEQ14164 716 aa18.59■□□□□ 0.57
RPS3-220ENST00000534555 HIC1Q14526 733 aa18.59■□□□□ 0.57
RPS3-220ENST00000534555 MBTPS1Q14703 1052 aa18.59■□□□□ 0.57
RPS3-220ENST00000534555 DGKDQ16760 1214 aa18.59■□□□□ 0.57
RPS3-220ENST00000534555 TRIM71Q2Q1W2 868 aaKnown RBP18.59■□□□□ 0.57
RPS3-220ENST00000534555 TTC14Q96N46 770 aa18.59■□□□□ 0.57
RPS3-220ENST00000534555 DDX41Q9UJV9 622 aaKnown RBP18.59■□□□□ 0.57
RPS3-220ENST00000534555 A0A0D9SFI3 127 aa18.58■□□□□ 0.56
RPS3-220ENST00000534555 ZNF286BP0CG31 522 aa18.58■□□□□ 0.56
RPS3-220ENST00000534555 HSPD1P10809 573 aaKnown RBP18.58■□□□□ 0.56
RPS3-220ENST00000534555 PTK7Q13308 1070 aa18.58■□□□□ 0.56
RPS3-220ENST00000534555 MFSD10Q14728 455 aa18.58■□□□□ 0.56
RPS3-220ENST00000534555 STXBP2Q15833 593 aa18.58■□□□□ 0.56
RPS3-220ENST00000534555 CDC37Q16543 378 aaPredicted RBP18.58■□□□□ 0.56
RPS3-220ENST00000534555 KIAA0753Q2KHM9 967 aa18.58■□□□□ 0.56
RPS3-220ENST00000534555 NSUN6Q8TEA1 469 aaKnown RBP18.58■□□□□ 0.56
RPS3-220ENST00000534555 EVI5LQ96CN4 794 aa18.58■□□□□ 0.56
RPS3-220ENST00000534555 KIAA1217Q5T5P2 1943 aa18.57■□□□□ 0.56
RPS3-220ENST00000534555 SORBS3O60504 671 aa18.57■□□□□ 0.56
RPS3-220ENST00000534555 SSTR3P32745 418 aaPredicted RBP18.57■□□□□ 0.56
RPS3-220ENST00000534555 MCMDC2Q4G0Z9 681 aa18.57■□□□□ 0.56
RPS3-220ENST00000534555 PTCRAQ6ISU1 281 aaPredicted RBP18.57■□□□□ 0.56
RPS3-220ENST00000534555 ZNF589Q86UQ0 364 aaPredicted RBP18.57■□□□□ 0.56
RPS3-220ENST00000534555 TBC1D10CQ8IV04 446 aa18.57■□□□□ 0.56
RPS3-220ENST00000534555 FBXO22Q8NEZ5 403 aa18.57■□□□□ 0.56
RPS3-220ENST00000534555 RMDN3Q96TC7 470 aa18.57■□□□□ 0.56
RPS3-220ENST00000534555 ABCB11O95342 1321 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 PRR33A8MZF0 331 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 HAS3O00219 553 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 EFCAB14O75071 495 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 LGR5O75473 907 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 EIF2AK2P19525 551 aaKnown RBP18.56■□□□□ 0.56
RPS3-220ENST00000534555 GPATCH4Q5T3I0 446 aaKnown RBP18.56■□□□□ 0.56
RPS3-220ENST00000534555 MFSD6Q6ZSS7 791 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 ADGRF4Q8IZF3 695 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 DBF4BQ8NFT6 615 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 UIMC1Q96RL1 719 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 IWS1Q96ST2 819 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 INSL6Q9Y581 213 aa18.56■□□□□ 0.56
RPS3-220ENST00000534555 MYH7BA7E2Y1 1941 aa18.55■□□□□ 0.56
RPS3-220ENST00000534555 GRXCR2A6NFK2 248 aa18.55■□□□□ 0.56
RPS3-220ENST00000534555 H3BQ06 376 aaPredicted RBP18.55■□□□□ 0.56
RPS3-220ENST00000534555 ARHGEF16Q5VV41 709 aa18.55■□□□□ 0.56
RPS3-220ENST00000534555 MYOCDQ8IZQ8 938 aa18.55■□□□□ 0.56
RPS3-220ENST00000534555 KATNAL1Q9BW62 490 aa18.55■□□□□ 0.56
RPS3-220ENST00000534555 MRVI1Q9Y6F6 885 aa18.55■□□□□ 0.56
RPS3-220ENST00000534555 NEDD4P46934 1319 aa18.54■□□□□ 0.56
RPS3-220ENST00000534555 F2P00734 622 aa18.54■□□□□ 0.56
RPS3-220ENST00000534555 NR3C2P08235 984 aa18.54■□□□□ 0.56
RPS3-220ENST00000534555 NMIQ13287 307 aaPredicted RBP18.54■□□□□ 0.56
RPS3-220ENST00000534555 MKRN4PQ13434 485 aaPredicted RBP18.54■□□□□ 0.56
RPS3-220ENST00000534555 LAMC2Q13753 1193 aa18.54■□□□□ 0.56
RPS3-220ENST00000534555 QRICH1Q2TAL8 776 aa18.54■□□□□ 0.56
RPS3-220ENST00000534555 DHX37Q8IY37 1157 aaKnown RBP18.54■□□□□ 0.56
RPS3-220ENST00000534555 PPTC7Q8NI37 304 aa18.54■□□□□ 0.56
RPS3-220ENST00000534555 EMID1Q96A84 441 aaPredicted RBP18.54■□□□□ 0.56
RPS3-220ENST00000534555 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
RPS3-220ENST00000534555 EIF3JO75822 258 aaKnown RBP18.53■□□□□ 0.56
RPS3-220ENST00000534555 AMHP03971 560 aa18.53■□□□□ 0.56
RPS3-220ENST00000534555 THPOP40225 353 aa18.53■□□□□ 0.56
RPS3-220ENST00000534555 HTRA4P83105 476 aaPredicted RBP18.53■□□□□ 0.56
RPS3-220ENST00000534555 EPC2Q52LR7 807 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms