RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ARMC5Q96C12 935 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 ZNF333Q96JL9 665 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 CLMNQ96JQ2 1002 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 PTPN18Q99952 460 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 NYXQ9GZU5 481 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 TMX4Q9H1E5 349 aaPredicted RBP3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 DNAJC25Q9H1X3 360 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 STAP2Q9UGK3 403 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 PLAGL2Q9UPG8 496 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 AKAP2Q9Y2D5 859 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 SNX11Q9Y5W9 270 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 U3KQE9 123 aa3.97□□□□□ -1.77
CHMP4A-208ENST00000534106 PITPNM2Q9BZ72 1349 aa3.96□□□□□ -1.77
CHMP4A-208ENST00000534106 ERVV-1B6SEH8 477 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 DIAPH1O60610 1272 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 VIL1P09327 827 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 AFMP43652 599 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 SERPINB4P48594 390 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 CRHR2Q13324 411 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 GRM2Q14416 872 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 SPOCD1Q6ZMY3 1216 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 SULF2Q8IWU5 870 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 DEFB123Q8N688 67 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 RNF214Q8ND24 703 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 TBC1D16Q8TBP0 767 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 PPP1R16BQ96T49 567 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 ARID3AQ99856 593 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 UTP14AQ9BVJ6 771 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 EMILIN2Q9BXX0 1053 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 ARHGAP39Q9C0H5 1083 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 MYOZ2Q9NPC6 264 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 CSADQ9Y600 493 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 PTCH2Q9Y6C5 1203 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 EYSQ5T1H1 3165 aa3.96□□□□□ -1.78
CHMP4A-208ENST00000534106 MAP3K15Q6ZN16 1313 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 CDHR2Q9BYE9 1310 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 SCN11AQ9UI33 1791 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 NEFMP07197 916 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 RPS12P25398 132 aaKnown RBP3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 ZNF280AP59817 542 aaPredicted RBP3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 FKBP1BP68106 108 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 SP3Q02447 781 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 SREBF2Q12772 1141 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 GRAPQ13588 217 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 PROSER3Q2NL68 480 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 LDLRAD1Q5T700 205 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 SYDE1Q6ZW31 735 aaPredicted RBP3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 DDX46Q7L014 1031 aaKnown RBP3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 BHLHE22Q8NFJ8 381 aaPredicted RBP3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 GRAPLQ8TC17 118 aaPredicted RBP3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 EPS8L3Q8TE67 593 aaKnown RBP3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 SHISA4Q96DD7 197 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 LIN37Q96GY3 246 aaPredicted RBP3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 CITED4Q96RK1 184 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 FAM129BQ96TA1 746 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 GMLQ99445 158 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 PCDHGC5Q9Y5F6 944 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 PCDHAC2Q9Y5I4 1007 aa3.95□□□□□ -1.78
CHMP4A-208ENST00000534106 TRPM7Q96QT4 1865 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 TTC28Q96AY4 2481 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 DCDC2CA8MYV0 355 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 SASH1O94885 1247 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 XRCC5P13010 732 aaKnown RBP3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 ARNTP27540 789 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 CTGFP29279 349 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 PRKAR2BP31323 418 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 ERVK-24P63145 666 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 MESP2Q0VG99 397 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 AIMP1Q12904 312 aaKnown RBP3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 TCIRG1Q13488 830 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 SLC9C1Q4G0N8 1177 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 PPM1JQ5JR12 505 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 CC2D1BQ5T0F9 858 aaKnown RBP3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 KIF6Q6ZMV9 814 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 PPP1R42Q7Z4L9 355 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 NLRP10Q86W26 655 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 GPBAR1Q8TDU6 330 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 JARID2Q92833 1246 aaPredicted RBP3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 FAM89AQ96GI7 184 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 ERO1AQ96HE7 468 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 KIRREL1Q96J84 757 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 WNK4Q96J92 1243 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 HEXIM2Q96MH2 286 aaKnown RBP3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 TNKS2Q9H2K2 1166 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 C1orf115Q9H7X2 142 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 TRMT112Q9UI30 125 aaKnown RBP3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 SAMM50Q9Y512 469 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 AOX1Q06278 1338 aa3.94□□□□□ -1.78
CHMP4A-208ENST00000534106 CEMIPQ8WUJ3 1361 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 ZNF503-AS2A6NEH8 195 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 MANSC4A6NHS7 340 aaPredicted RBP3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 NFIBO00712 420 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 WNT10BO00744 389 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 GPR182O15218 404 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 GLI1P08151 1106 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 ZNF865P0CJ78 1059 aaPredicted RBP3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 EIF2S2P20042 333 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms