RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 SLC38A10Q9HBR0 1119 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 DDX19AQ9NUU7 478 aaKnown RBP11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 CTDP1Q9Y5B0 961 aaPredicted RBP11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 PCDHB6Q9Y5E3 794 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 FAM205CA6NFA0 338 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 ADAMTS3O15072 1205 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 CUTAO60888 179 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 LETM1O95202 739 aaPredicted RBP11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 EN2P19622 333 aaPredicted RBP11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 CMA1P23946 247 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 ADORA2AP29274 412 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 ATP2C1P98194 919 aaPredicted RBP11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 IKQ13123 557 aaPredicted RBP11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 PLS1Q14651 629 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 KCTD2Q14681 263 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 GSE1Q14687 1217 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 NONOQ15233 471 aaKnown RBP eCLIP11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 WDR78Q5VTH9 848 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 DPP9Q86TI2 863 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 NCAPG2Q86XI2 1143 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 FBXO11Q86XK2 927 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 KRI1Q8N9T8 703 aaKnown RBP11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 ZNF579Q8NAF0 562 aaKnown RBP11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 CHST13Q8NET6 341 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 MRPS27Q92552 414 aaKnown RBP11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 FBXO28Q9NVF7 368 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 PCDHA1Q9Y5I3 950 aa11.45□□□□□ -0.58
LDLRAD3-206ENST00000534091 LAD1O00515 517 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 LIG1P18858 919 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 FAM160A1Q05DH4 1040 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 AP3B2Q13367 1082 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 ZSCAN23Q3MJ62 389 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 ARL6IP4Q66PJ3 421 aaKnown RBP11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 CCDC73Q6ZRK6 1079 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 UBE2Q1Q7Z7E8 422 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 ENGASEQ8NFI3 743 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 RASGRP4Q8TDF6 673 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 MMP19Q99542 508 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 HTATIP2Q9BUP3 242 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 FBXO2Q9UK22 296 aaPredicted RBP11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 SRPRBQ9Y5M8 271 aaKnown RBP11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 PDE4DIPQ5VU43 2346 aa11.44□□□□□ -0.58
LDLRAD3-206ENST00000534091 ABCB11O95342 1321 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 PLXNA1Q9UIW2 1896 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 PIK3CDO00329 1044 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 PEX10O60683 326 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 PRKAR2AP13861 404 aaKnown RBP11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 MARCKSP29966 332 aaPredicted RBP11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 CACNB2Q08289 660 aaPredicted RBP11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 RESP18Q5W5W9 173 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 RBM43Q6ZSC3 357 aaKnown RBP11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 NEK8Q86SG6 692 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 FSIP1Q8NA03 581 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 NAP1L4Q99733 375 aaKnown RBP11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 CLSTN2Q9H4D0 955 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 PSTPIP2Q9H939 334 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 OGDHLQ9ULD0 1010 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 HPSEQ9Y251 543 aa11.43□□□□□ -0.58
LDLRAD3-206ENST00000534091 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 WNT7AO00755 349 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 FOSP01100 380 aaPredicted RBP11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 TFRCP02786 760 aaKnown RBP11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 ICAM1P05362 532 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 PRPHP41219 470 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 GHRHRQ02643 423 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 SNW1Q13573 536 aaKnown RBP11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 INF2Q27J81 1249 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 PRPF38BQ5VTL8 546 aaKnown RBP11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 SNRNP48Q6IEG0 339 aaKnown RBP11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 SHC4Q6S5L8 630 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 MOXD1Q6UVY6 613 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 FMR1NBQ8N0W7 255 aaPredicted RBP11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 SAMD3Q8N6K7 520 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 TIGD1Q96MW7 591 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 DEFB118Q96PH6 123 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 GZF1Q9H116 711 aaPredicted RBP11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 NUP62CLQ9H1M0 184 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 GOLPH3LQ9H4A5 285 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 DACT1Q9NYF0 836 aa11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 MRPL11Q9Y3B7 192 aaKnown RBP11.42□□□□□ -0.58
LDLRAD3-206ENST00000534091 PFASO15067 1338 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 SYNGAP1Q96PV0 1343 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 DNAJC25-GNG10A0A024R161 153 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 FSD2A1L4K1 749 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 MEIS2O14770 477 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 CTAGE5O15320 804 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 NR1I2O75469 434 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 FARP2O94887 1054 aaPredicted RBP11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 GCFC2P16383 781 aaKnown RBP11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 ATP2B1P20020 1258 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 PTGDRQ13258 359 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 ZNF174Q15697 407 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 ZNF792Q3KQV3 632 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 JAKMIP3Q5VZ66 844 aa11.41□□□□□ -0.58
LDLRAD3-206ENST00000534091 LRSAM1Q6UWE0 723 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms