RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 PDE6AP16499 860 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 ECE1P42892 770 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 RHBDL3P58872 404 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 IGBP1P78318 339 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 MAP3K10Q02779 954 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 UBE3CQ15386 1083 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 CCDC85BQ15834 202 aaPredicted RBP9.15□□□□□ -0.94
CASP4-212ENST00000533730 DEFB115Q30KQ5 88 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 DCAF15Q66K64 600 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 ANKS3Q6ZW76 656 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 CENPQQ7L2Z9 268 aaPredicted RBP9.15□□□□□ -0.94
CASP4-212ENST00000533730 SAPCD2Q86UD0 394 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 RELL1Q8IUW5 271 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 TEX11Q8IYF3 940 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 C3orf58Q8NDZ4 430 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 GLIS3Q8NEA6 775 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 MICAL1Q8TDZ2 1067 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 OTUD7AQ8TE49 926 aaPredicted RBP9.15□□□□□ -0.94
CASP4-212ENST00000533730 TMEM39BQ9GZU3 492 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 AATFQ9NY61 560 aaKnown RBP eCLIP9.15□□□□□ -0.94
CASP4-212ENST00000533730 KCNH4Q9UQ05 1017 aa9.15□□□□□ -0.94
CASP4-212ENST00000533730 COL2A1P02458 1487 aaPredicted RBP9.15□□□□□ -0.95
CASP4-212ENST00000533730 ZNF532Q9HCE3 1301 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 WDHD1O75717 1129 aaPredicted RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 GBP2P32456 591 aaPredicted RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 ADD2P35612 726 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 EIF4A3P38919 411 aaKnown RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 RGS3P49796 1198 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 CACNB3P54284 484 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 HUNKP57058 714 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 MAP3K11Q16584 847 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 NBPF12Q5TAG4 269 aaPredicted RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 PRAMEF18Q5VWM3 479 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 TSHZ3Q63HK5 1081 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 EVI5LQ96CN4 794 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 EDC3Q96F86 508 aaKnown RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 TEPSINQ96N21 525 aa9.14□□□□□ -0.95
CASP4-212ENST00000533730 SRPK1Q96SB4 655 aaKnown RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 CRNKL1Q9BZJ0 848 aaKnown RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 DHX36Q9H2U1 1008 aaKnown RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 SCAF8Q9UPN6 1271 aaKnown RBP9.14□□□□□ -0.95
CASP4-212ENST00000533730 ATRNL1Q5VV63 1379 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 TCRBV5S4A2TA0A5A2 114 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 ENPP3O14638 875 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 MAP2K3P46734 347 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 TCP10Q12799 353 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 NFIAQ12857 509 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 PWP1Q13610 501 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 DLK2Q6UY11 383 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 ADGRA1Q86SQ6 560 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 SH3RF3Q8TEJ3 882 aaPredicted RBP9.13□□□□□ -0.95
CASP4-212ENST00000533730 CCDC136Q96JN2 1154 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 TMEM74Q96NL1 305 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 SLC30A3Q99726 388 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 FSD1Q9BTV5 496 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 EHD4Q9H223 541 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 SIRPGQ9P1W8 387 aa9.13□□□□□ -0.95
CASP4-212ENST00000533730 MYO5AQ9Y4I1 1855 aaKnown RBP9.13□□□□□ -0.95
CASP4-212ENST00000533730 RNF113AO15541 343 aaKnown RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 KLF4O43474 513 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 XYLBO75191 536 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 BMP4P12644 408 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 FCGRTP55899 365 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 HTRA3P83110 453 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 PICALMQ13492 652 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 RNF187Q5TA31 235 aaPredicted RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 RGMBQ6NW40 437 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 DNAJC5GQ8N7S2 189 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 MIGA1Q8NAN2 632 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 TGFBRAP1Q8WUH2 860 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 ZNF296Q8WUU4 475 aaPredicted RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 HNRNPLLQ8WVV9 542 aaKnown RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 APPBP2Q92624 585 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 ACDQ96AP0 544 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 CAPNS2Q96L46 248 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 RNPC3Q96LT9 517 aaKnown RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 RIOK1Q9BRS2 568 aaKnown RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 ZNF341Q9BYN7 854 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 TRIM55Q9BYV6 548 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 OSBPL5Q9H0X9 879 aaPredicted RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 C11orf16Q9NQ32 467 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 DDX4Q9NQI0 724 aaKnown RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 LATS2Q9NRM7 1088 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 ABI2Q9NYB9 513 aaPredicted RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 KLF15Q9UIH9 416 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 ANGEL1Q9UNK9 670 aaKnown RBP9.12□□□□□ -0.95
CASP4-212ENST00000533730 SSC5DA1L4H1 1573 aa9.12□□□□□ -0.95
CASP4-212ENST00000533730 MYH7P12883 1935 aa9.11□□□□□ -0.95
CASP4-212ENST00000533730 FLT1P17948 1338 aa9.11□□□□□ -0.95
CASP4-212ENST00000533730 A0A1W2PP55 124 aa9.11□□□□□ -0.95
CASP4-212ENST00000533730 UBE2Q2LH0YL09 131 aa9.11□□□□□ -0.95
CASP4-212ENST00000533730 USP2O75604 605 aaPredicted RBP9.11□□□□□ -0.95
CASP4-212ENST00000533730 HLA-DOAP06340 250 aa9.11□□□□□ -0.95
CASP4-212ENST00000533730 SOX9P48436 509 aa9.11□□□□□ -0.95
CASP4-212ENST00000533730 ZNF157P51786 506 aaPredicted RBP9.11□□□□□ -0.95
CASP4-212ENST00000533730 DYNLL1P63167 89 aaKnown RBP9.11□□□□□ -0.95
CASP4-212ENST00000533730 NOGQ13253 232 aa9.11□□□□□ -0.95
CASP4-212ENST00000533730 PRKG1Q13976 671 aa9.11□□□□□ -0.95
CASP4-212ENST00000533730 KIAA0319Q5VV43 1072 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms