RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 KIAA1217Q5T5P2 1943 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 A0A0U1RQG5 324 aaPredicted RBP4.4□□□□□ -1.7
ATM-221ENST00000533690 OPLAHO14841 1288 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 SMC2O95347 1197 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 CYP3A4P08684 503 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 MAGEA9P43362 315 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 DNM2P50570 870 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 ZNF131P52739 623 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 TPM4P67936 248 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 MAP3K10Q02779 954 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 MAP3K12Q12852 859 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 PTGDRQ13258 359 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 ITGB3BPQ13352 177 aaPredicted RBP4.4□□□□□ -1.7
ATM-221ENST00000533690 SIX1Q15475 284 aaPredicted RBP4.4□□□□□ -1.7
ATM-221ENST00000533690 NAB2Q15742 525 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 CLEC16AQ2KHT3 1053 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 METTL24Q5JXM2 366 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 ANKRD40Q6AI12 368 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 UNC13DQ70J99 1090 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 PACS2Q86VP3 889 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 DZIP3Q86Y13 1208 aaKnown RBP4.4□□□□□ -1.7
ATM-221ENST00000533690 RELL1Q8IUW5 271 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 TSEN2Q8NCE0 465 aaKnown RBP4.4□□□□□ -1.7
ATM-221ENST00000533690 NEDD1Q8NHV4 660 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 NELFBQ8WX92 580 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 ESR2Q92731 530 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 MYL10Q9BUA6 226 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 SLC26A6Q9BXS9 759 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 ZDHHC18Q9NUE0 388 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 GEMIN8Q9NWZ8 242 aaKnown RBP4.4□□□□□ -1.7
ATM-221ENST00000533690 TRMT1Q9NXH9 659 aaKnown RBP4.4□□□□□ -1.7
ATM-221ENST00000533690 SUGT1Q9Y2Z0 365 aa4.4□□□□□ -1.7
ATM-221ENST00000533690 UBE4BO95155 1302 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 PITPNM2Q9BZ72 1349 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 MAP3K13O43283 966 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 PPFIA4O75335 1185 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 GFPT2O94808 682 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 ATF3P18847 181 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 CIITAP33076 1130 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 LRRC63Q05C16 580 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 MCM6Q14566 821 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 ZNF827Q17R98 1081 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 ALS2CLQ60I27 953 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 BTNL9Q6UXG8 535 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 LDHAL6AQ6ZMR3 332 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 GBP6Q6ZN66 633 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 TRMT44Q8IYL2 757 aaKnown RBP4.4□□□□□ -1.71
ATM-221ENST00000533690 BLIDQ8IZY5 108 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 C12orf50Q8NA57 414 aaPredicted RBP4.4□□□□□ -1.71
ATM-221ENST00000533690 P2RX5Q93086 422 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 HES6Q96HZ4 224 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 CEP63Q96MT8 703 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 TSGA10Q9BZW7 698 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 TRIM10Q9UDY6 481 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 NARFQ9UHQ1 456 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 EPN1Q9Y6I3 576 aaPredicted RBP4.4□□□□□ -1.71
ATM-221ENST00000533690 MYH10P35580 1976 aa4.4□□□□□ -1.71
ATM-221ENST00000533690 PLXNB2O15031 1838 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 MAGEB6P1A0A0J9YX57 407 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 CCDC66A2RUB6 948 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 ZNF233A6NK53 670 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 PIK3CDO00329 1044 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 EIF3HO15372 352 aaKnown RBP eCLIP4.39□□□□□ -1.714e-7■■■■□ 22.1
ATM-221ENST00000533690 DDX3YO15523 660 aaKnown RBP4.39□□□□□ -1.71
ATM-221ENST00000533690 MUTP22033 750 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 CDC25AP30304 524 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 PSEN1P49768 467 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 GRIK5Q16478 980 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 EDRF1Q3B7T1 1238 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 CCDC152Q4G0S7 254 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 ARSHQ5FYA8 562 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 TMCO3Q6UWJ1 677 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 SIAH1Q8IUQ4 282 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 CALR3Q96L12 384 aaKnown RBP4.39□□□□□ -1.71
ATM-221ENST00000533690 DESI2Q9BSY9 194 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 VPS54Q9P1Q0 977 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 VAV3Q9UKW4 847 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 FAM184BQ9ULE4 1060 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 GDAQ9Y2T3 454 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 CAPN6Q9Y6Q1 641 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 SLC4A4Q9Y6R1 1079 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 CTAGE9A4FU28 777 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 DYNLL1P63167 89 aaKnown RBP4.39□□□□□ -1.71
ATM-221ENST00000533690 APBA1Q02410 837 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 PDAP1Q13442 181 aaKnown RBP4.39□□□□□ -1.71
ATM-221ENST00000533690 EMBQ6PCB8 327 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 OLFM4Q6UX06 510 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 ZNF467Q7Z7K2 595 aaPredicted RBP4.39□□□□□ -1.71
ATM-221ENST00000533690 OR8K1Q8NGG5 319 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 RAD54LQ92698 747 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 NHEJ1Q9H9Q4 299 aaPredicted RBP4.39□□□□□ -1.71
ATM-221ENST00000533690 SUGCTQ9HAC7 445 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 RIC8AQ9NPQ8 531 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 EXOC1Q9NV70 894 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 HOOK1Q9UJC3 728 aaKnown RBP4.39□□□□□ -1.71
ATM-221ENST00000533690 CTNND2Q9UQB3 1225 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 JRKLQ9Y4A0 524 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 MYO1CO00159 1063 aa4.39□□□□□ -1.71
ATM-221ENST00000533690 IFIT3O14879 490 aaKnown RBP4.39□□□□□ -1.71
ATM-221ENST00000533690 MAPK13O15264 365 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms