RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 AK2P54819 239 aa23.51■■□□□ 1.35
CCS-208ENST00000533244 NAPAP54920 295 aa23.51■■□□□ 1.35
CCS-208ENST00000533244 BEX3Q00994 111 aa23.51■■□□□ 1.35
CCS-208ENST00000533244 PHKBQ93100 1093 aa23.51■■□□□ 1.35
CCS-208ENST00000533244 RIC8AQ9NPQ8 531 aa23.51■■□□□ 1.35
CCS-208ENST00000533244 MYCLP12524 364 aaPredicted RBP23.5■■□□□ 1.35
CCS-208ENST00000533244 MRPS9P82933 396 aaKnown RBP23.5■■□□□ 1.35
CCS-208ENST00000533244 ANKRD1Q15327 319 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 UBE2SQ16763 222 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 SEPT14Q6ZU15 432 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 C7orf61Q8IZ16 206 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 TPCN1Q9ULQ1 816 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 ELP1O95163 1332 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 STAM2O75886 525 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 RTP1P59025 263 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 OR6J1Q8NGC5 347 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 COPS5Q92905 334 aa23.5■■□□□ 1.35
CCS-208ENST00000533244 DDX41Q9UJV9 622 aaKnown RBP23.5■■□□□ 1.35
CCS-208ENST00000533244 ESYT2A0FGR8 921 aa23.49■■□□□ 1.35
CCS-208ENST00000533244 PCNX4Q63HM2 1172 aa23.49■■□□□ 1.35
CCS-208ENST00000533244 XRRA1Q6P2D8 792 aa23.49■■□□□ 1.35
CCS-208ENST00000533244 GLT1D1Q96MS3 346 aa23.49■■□□□ 1.35
CCS-208ENST00000533244 INPP4AQ96PE3 977 aaPredicted RBP23.49■■□□□ 1.35
CCS-208ENST00000533244 SLC26A6Q9BXS9 759 aa23.49■■□□□ 1.35
CCS-208ENST00000533244 STARD7Q9NQZ5 370 aa23.49■■□□□ 1.35
CCS-208ENST00000533244 SMCO2A6NFE2 343 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 A6NJR5 290 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 PFKFB2O60825 505 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 CLK2P49760 499 aaKnown RBP23.48■■□□□ 1.35
CCS-208ENST00000533244 ADCY7P51828 1080 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 ARHGAP1Q07960 439 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 SCRN1Q12765 414 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 STK3Q13188 491 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 LY6KQ17RY6 165 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 KIF2CQ99661 725 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 GLT8D2Q9H1C3 349 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 MRVI1Q9Y6F6 885 aa23.48■■□□□ 1.35
CCS-208ENST00000533244 ZEB2O60315 1214 aa23.47■■□□□ 1.35
CCS-208ENST00000533244 RBM25P49756 843 aaKnown RBP23.47■■□□□ 1.35
CCS-208ENST00000533244 CPT1AP50416 773 aa23.47■■□□□ 1.35
CCS-208ENST00000533244 NEK4P51957 841 aa23.47■■□□□ 1.35
CCS-208ENST00000533244 AKAP17AQ02040 695 aaKnown RBP23.47■■□□□ 1.35
CCS-208ENST00000533244 TRIM60Q495X7 471 aa23.47■■□□□ 1.35
CCS-208ENST00000533244 KCNV1Q6PIU1 500 aa23.47■■□□□ 1.35
CCS-208ENST00000533244 EMID1Q96A84 441 aaPredicted RBP23.47■■□□□ 1.35
CCS-208ENST00000533244 ZMYND12Q9H0C1 365 aa23.47■■□□□ 1.35
CCS-208ENST00000533244 PCDHA6Q9UN73 950 aa23.47■■□□□ 1.35
CCS-208ENST00000533244 PCDHA8Q9Y5H6 950 aa23.47■■□□□ 1.35
CCS-208ENST00000533244 PPFIA3O75145 1194 aa23.46■■□□□ 1.35
CCS-208ENST00000533244 CABYRO75952 493 aa23.46■■□□□ 1.35
CCS-208ENST00000533244 GH1P01241 217 aa23.46■■□□□ 1.35
CCS-208ENST00000533244 TGFB3P10600 412 aa23.46■■□□□ 1.35
CCS-208ENST00000533244 ICAM3P32942 547 aa23.46■■□□□ 1.35
CCS-208ENST00000533244 CXCL17Q6UXB2 119 aa23.46■■□□□ 1.35
CCS-208ENST00000533244 ZFP91Q96JP5 570 aaPredicted RBP23.46■■□□□ 1.35
CCS-208ENST00000533244 SLKQ9H2G2 1235 aaPredicted RBP23.46■■□□□ 1.35
CCS-208ENST00000533244 SPDYE3A6NKU9 549 aa23.45■■□□□ 1.34
CCS-208ENST00000533244 CPLX1O14810 134 aa23.45■■□□□ 1.34
CCS-208ENST00000533244 FOSP01100 380 aaPredicted RBP23.45■■□□□ 1.34
CCS-208ENST00000533244 CDK7P50613 346 aa23.45■■□□□ 1.34
CCS-208ENST00000533244 TRIM22Q8IYM9 498 aa23.45■■□□□ 1.34
CCS-208ENST00000533244 CCDC12Q8WUD4 166 aaPredicted RBP23.45■■□□□ 1.34
CCS-208ENST00000533244 C22orf23Q9BZE7 217 aa23.45■■□□□ 1.34
CCS-208ENST00000533244 ATP11BQ9Y2G3 1177 aa23.45■■□□□ 1.34
CCS-208ENST00000533244 GTF3C3Q9Y5Q9 886 aa23.45■■□□□ 1.34
CCS-208ENST00000533244 PURAQ00577 322 aaKnown RBP23.44■■□□□ 1.34
CCS-208ENST00000533244 SSRP1Q08945 709 aaKnown RBP23.44■■□□□ 1.34
CCS-208ENST00000533244 SEMA3FQ13275 785 aa23.44■■□□□ 1.34
CCS-208ENST00000533244 AP3B2Q13367 1082 aa23.44■■□□□ 1.34
CCS-208ENST00000533244 GNPTABQ3T906 1256 aa23.44■■□□□ 1.34
CCS-208ENST00000533244 CPLX2Q6PUV4 134 aaKnown RBP23.44■■□□□ 1.34
CCS-208ENST00000533244 ANKRD33Q7Z3H0 272 aa23.44■■□□□ 1.34
CCS-208ENST00000533244 SLC43A3Q8NBI5 491 aa23.44■■□□□ 1.34
CCS-208ENST00000533244 POLR3EQ9NVU0 708 aa23.44■■□□□ 1.34
CCS-208ENST00000533244 A0A0U1RQG5 324 aaPredicted RBP23.43■■□□□ 1.34
CCS-208ENST00000533244 SPATA31C2B4DYI2 1134 aa23.43■■□□□ 1.34
CCS-208ENST00000533244 DEXIO95424 95 aa23.43■■□□□ 1.34
CCS-208ENST00000533244 LARGE1O95461 756 aa23.43■■□□□ 1.34
CCS-208ENST00000533244 UBA1P22314 1058 aaKnown RBP23.43■■□□□ 1.34
CCS-208ENST00000533244 SP2Q02086 613 aa23.43■■□□□ 1.34
CCS-208ENST00000533244 TLE2Q04725 743 aa23.43■■□□□ 1.34
CCS-208ENST00000533244 TOX2Q96NM4 488 aa23.43■■□□□ 1.34
CCS-208ENST00000533244 SH3GLB2Q9NR46 395 aa23.43■■□□□ 1.34
CCS-208ENST00000533244 ZMYND8Q9ULU4 1186 aaPredicted RBP23.43■■□□□ 1.34
CCS-208ENST00000533244 SCN10AQ9Y5Y9 1956 aa23.43■■□□□ 1.34
CCS-208ENST00000533244 GRIN2DO15399 1336 aa23.43■■□□□ 1.34
CCS-208ENST00000533244 FIBPO43427 364 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 MMP3P08254 477 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 ME3Q16798 604 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 BRDTQ58F21 947 aaPredicted RBP23.42■■□□□ 1.34
CCS-208ENST00000533244 CCDC148Q8NFR7 591 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 AFG1LQ8WV93 481 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 ANO3Q9BYT9 981 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 EHMT1Q9H9B1 1298 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 C6orf50Q9HD87 102 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 RTEL1Q9NZ71 1219 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 UBIAD1Q9Y5Z9 338 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 STK36Q9NRP7 1315 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 ARVCFO00192 962 aa23.42■■□□□ 1.34
CCS-208ENST00000533244 ADAMTS3O15072 1205 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms