RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 CYP3A7P24462 503 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 ADORA2AP29274 412 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 CIITAP33076 1130 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 ALDH5A1P51649 535 aaPredicted RBP16.12■□□□□ 0.17
TRIM3-212ENST00000533064 CNTN2Q02246 1040 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 KIF22Q14807 665 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 PTPAQ15257 358 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 FAM133AQ8N9E0 248 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 PURBQ96QR8 312 aaKnown RBP16.12■□□□□ 0.17
TRIM3-212ENST00000533064 CFHR5Q9BXR6 569 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 RNF186Q9NXI6 227 aa16.12■□□□□ 0.17
TRIM3-212ENST00000533064 SLC15A5A6NIM6 579 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 TBC1D8O95759 1140 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 PGK2P07205 417 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 NR3C2P08235 984 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 MARCKSP29966 332 aaPredicted RBP16.11■□□□□ 0.17
TRIM3-212ENST00000533064 UBE2HP62256 183 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 ATP2C1P98194 919 aaPredicted RBP16.11■□□□□ 0.17
TRIM3-212ENST00000533064 SETQ01105 290 aaPredicted RBP16.11■□□□□ 0.17
TRIM3-212ENST00000533064 GRB14Q14449 540 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 CALCRLQ16602 461 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 ARL6IP4Q66PJ3 421 aaKnown RBP16.11■□□□□ 0.17
TRIM3-212ENST00000533064 DPP9Q86TI2 863 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 BEGAINQ9BUH8 593 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 MORC2Q9Y6X9 1032 aaPredicted RBP16.11■□□□□ 0.17
TRIM3-212ENST00000533064 DNAJC25-GNG10A0A024R161 153 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 LOC102724159A0A0B4J2E5 919 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 TNPO2O14787 897 aaKnown RBP16.11■□□□□ 0.17
TRIM3-212ENST00000533064 STAM2O75886 525 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 OR52Z1P0C646 297 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 PWP2Q15269 919 aaKnown RBP16.11■□□□□ 0.17
TRIM3-212ENST00000533064 Q4G0T1 1027 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 CEP55Q53EZ4 464 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 PRR16Q569H4 304 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 FERMT2Q96AC1 680 aa16.11■□□□□ 0.17
TRIM3-212ENST00000533064 GZF1Q9H116 711 aaPredicted RBP16.11■□□□□ 0.17
TRIM3-212ENST00000533064 SLC37A4O43826 429 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 GADD45BO75293 160 aaPredicted RBP16.1■□□□□ 0.17
TRIM3-212ENST00000533064 ECM2O94769 699 aaPredicted RBP16.1■□□□□ 0.17
TRIM3-212ENST00000533064 PRPHP41219 470 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 FCGRTP55899 365 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 SP3Q02447 781 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 MAP2K1Q02750 393 aaPredicted RBP16.1■□□□□ 0.17
TRIM3-212ENST00000533064 PDE4DQ08499 809 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 STXBP2Q15833 593 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 VSIG10LQ86VR7 867 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
TRIM3-212ENST00000533064 IL31RAQ8NI17 732 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 NUDT12Q9BQG2 462 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 MXRA8Q9BRK3 442 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 SAGE1Q9NXZ1 904 aa16.1■□□□□ 0.17
TRIM3-212ENST00000533064 SOWAHBA6NEL2 793 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 ASB14A6NK59 587 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 FAM86B1E9PN63 330 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 EDIL3O43854 480 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 FAM86B2P0C5J1 330 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 LACTBP83111 547 aaPredicted RBP16.09■□□□□ 0.17
TRIM3-212ENST00000533064 TMEM266Q2M3C6 531 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 PLA2G4DQ86XP0 818 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 SLFN12Q8IYM2 578 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 SOCS4Q8WXH5 440 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 MBOAT7Q96N66 472 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 SRPRBQ9Y5M8 271 aaKnown RBP16.09■□□□□ 0.17
TRIM3-212ENST00000533064 LOXHD1Q8IVV2 1947 aa16.09■□□□□ 0.17
TRIM3-212ENST00000533064 TBX3O15119 743 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 CUTAO60888 179 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 PSMC4P43686 418 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 MRPS9P82933 396 aaKnown RBP16.08■□□□□ 0.17
TRIM3-212ENST00000533064 ZNF792Q3KQV3 632 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 GNPTABQ3T906 1256 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 DTHD1Q6ZMT9 781 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 NLRX1Q86UT6 975 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 C4orf32Q8N8J7 132 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 RAB34Q9BZG1 259 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 TMEM60Q9H2L4 133 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 PCDHA7Q9UN72 937 aa16.08■□□□□ 0.17
TRIM3-212ENST00000533064 DIS3Q9Y2L1 958 aaKnown RBP16.08■□□□□ 0.17
TRIM3-212ENST00000533064 CEP350Q5VT06 3117 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 MEIS1O00470 390 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 EIF3JO75822 258 aaKnown RBP16.08■□□□□ 0.16
TRIM3-212ENST00000533064 MAP2K5Q13163 448 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 MTMR1Q13613 665 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 ADALQ6DHV7 355 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 CAVIN1Q6NZI2 390 aaKnown RBP16.08■□□□□ 0.16
TRIM3-212ENST00000533064 ZNF467Q7Z7K2 595 aaPredicted RBP16.08■□□□□ 0.16
TRIM3-212ENST00000533064 CYP2W1Q8TAV3 490 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 CDHR1Q96JP9 859 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 FAM20AQ96MK3 541 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 JADE2Q9NQC1 790 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 UBIAD1Q9Y5Z9 338 aa16.08■□□□□ 0.16
TRIM3-212ENST00000533064 ASTN1O14525 1302 aa16.07■□□□□ 0.16
TRIM3-212ENST00000533064 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
TRIM3-212ENST00000533064 VWA3AA6NCI4 1184 aa16.07■□□□□ 0.16
TRIM3-212ENST00000533064 MAFGO15525 162 aa16.07■□□□□ 0.16
TRIM3-212ENST00000533064 COBLO75128 1261 aa16.07■□□□□ 0.16
TRIM3-212ENST00000533064 RGS2P41220 211 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms