RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 MRVI1Q9Y6F6 885 aa20.69■□□□□ 0.9
PCF11-206ENST00000533018 E7EWF7 191 aa20.68■□□□□ 0.9
PCF11-206ENST00000533018 PPP1R11O60927 126 aaPredicted RBP20.68■□□□□ 0.9
PCF11-206ENST00000533018 CASTP20810 708 aaKnown RBP20.68■□□□□ 0.9
PCF11-206ENST00000533018 HOXA13P31271 388 aaPredicted RBP20.68■□□□□ 0.9
PCF11-206ENST00000533018 HSD17B4P51659 736 aa20.68■□□□□ 0.9
PCF11-206ENST00000533018 PTPN11Q06124 597 aaPredicted RBP20.68■□□□□ 0.9
PCF11-206ENST00000533018 ARHGAP1Q07960 439 aa20.68■□□□□ 0.9
PCF11-206ENST00000533018 GRM4Q14833 912 aa20.68■□□□□ 0.9
PCF11-206ENST00000533018 PPM1EQ8WY54 764 aa20.68■□□□□ 0.9
PCF11-206ENST00000533018 PIGSQ96S52 555 aa20.68■□□□□ 0.9
PCF11-206ENST00000533018 FTOQ9C0B1 505 aaKnown RBP eCLIP20.68■□□□□ 0.9
PCF11-206ENST00000533018 OPLAHO14841 1288 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 SGSM2O43147 1006 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 PFKMP08237 780 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 ACTN1P12814 892 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 RABGGTBP53611 331 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 TRAF1Q13077 416 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 BFSP2Q13515 415 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 PTGISQ16647 500 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 DGKDQ16760 1214 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 TMEM67Q5HYA8 995 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 CATIPQ7Z7H3 387 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 DHX37Q8IY37 1157 aaKnown RBP20.67■□□□□ 0.9
PCF11-206ENST00000533018 MTMR8Q96EF0 704 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 SENP2Q9HC62 589 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 MAP3K20Q9NYL2 800 aaKnown RBP20.67■□□□□ 0.9
PCF11-206ENST00000533018 DDX41Q9UJV9 622 aaKnown RBP20.67■□□□□ 0.9
PCF11-206ENST00000533018 TAF6LQ9Y6J9 622 aa20.67■□□□□ 0.9
PCF11-206ENST00000533018 SORBS3O60504 671 aa20.66■□□□□ 0.9
PCF11-206ENST00000533018 ATP2A2P16615 1042 aaKnown RBP20.66■□□□□ 0.9
PCF11-206ENST00000533018 FCHSD1Q86WN1 690 aa20.66■□□□□ 0.9
PCF11-206ENST00000533018 PIBF1Q8WXW3 757 aa20.66■□□□□ 0.9
PCF11-206ENST00000533018 GCOM1H8Y6P7 765 aaPredicted RBP20.65■□□□□ 0.9
PCF11-206ENST00000533018 PITPNM1O00562 1244 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 IQCF3P0C7M6 154 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 POLR2MP0CAP2 368 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 IGFBP4P22692 258 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 RFC2P35250 354 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 LAMC2Q13753 1193 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 STOX1Q6ZVD7 989 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 CCDC155Q8N6L0 562 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 C7orf31Q8N865 590 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 PDCD2LQ9BRP1 358 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 ALG1Q9BT22 464 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 RIOX1Q9H6W3 641 aa20.65■□□□□ 0.9
PCF11-206ENST00000533018 YBX2Q9Y2T7 364 aaKnown RBP20.65■□□□□ 0.9
PCF11-206ENST00000533018 MYOGP15173 224 aa20.64■□□□□ 0.89
PCF11-206ENST00000533018 PGM5Q15124 567 aa20.64■□□□□ 0.89
PCF11-206ENST00000533018 PPP2R2DQ66LE6 453 aa20.64■□□□□ 0.89
PCF11-206ENST00000533018 GDF6Q6KF10 455 aaPredicted RBP20.64■□□□□ 0.89
PCF11-206ENST00000533018 SAMD3Q8N6K7 520 aa20.64■□□□□ 0.89
PCF11-206ENST00000533018 MAP4K1Q92918 833 aa20.64■□□□□ 0.89
PCF11-206ENST00000533018 VWCEQ96DN2 955 aa20.64■□□□□ 0.89
PCF11-206ENST00000533018 ZFP91Q96JP5 570 aaPredicted RBP20.64■□□□□ 0.89
PCF11-206ENST00000533018 CHD7Q9P2D1 2997 aa20.64■□□□□ 0.89
PCF11-206ENST00000533018 RBM8AQ9Y5S9 174 aaKnown RBP20.64■□□□□ 0.89
PCF11-206ENST00000533018 TANC1Q9C0D5 1861 aa20.63■□□□□ 0.89
PCF11-206ENST00000533018 PNMA6FA0A0J9YX94 578 aa20.63■□□□□ 0.89
PCF11-206ENST00000533018 TROAPQ12815 778 aa20.63■□□□□ 0.89
PCF11-206ENST00000533018 KCNV1Q6PIU1 500 aa20.63■□□□□ 0.89
PCF11-206ENST00000533018 PPTC7Q8NI37 304 aa20.63■□□□□ 0.89
PCF11-206ENST00000533018 KAT2BQ92831 832 aa20.63■□□□□ 0.89
PCF11-206ENST00000533018 KATNAL1Q9BW62 490 aa20.63■□□□□ 0.89
PCF11-206ENST00000533018 PCDHA11Q9Y5I1 949 aa20.63■□□□□ 0.89
PCF11-206ENST00000533018 CYTH3O43739 400 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 ZNF286BP0CG31 522 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 CCND2P30279 289 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 PSEN2P49810 448 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 GHRHRQ02643 423 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 SLC35G1Q2M3R5 365 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 CASC1Q6TDU7 716 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 VSIG10LQ86VR7 867 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 USP38Q8NB14 1042 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 CTCFLQ8NI51 663 aaPredicted RBP20.62■□□□□ 0.89
PCF11-206ENST00000533018 EMID1Q96A84 441 aaPredicted RBP20.62■□□□□ 0.89
PCF11-206ENST00000533018 HDAC6Q9UBN7 1215 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 TET1Q8NFU7 2136 aa20.62■□□□□ 0.89
PCF11-206ENST00000533018 SPTBN5Q9NRC6 3674 aaKnown RBP20.61■□□□□ 0.89
PCF11-206ENST00000533018 RGS20O76081 388 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 GGPS1O95749 300 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 ANTXR2P58335 489 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 MFSD10Q14728 455 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 CCDC85BQ15834 202 aaPredicted RBP20.61■□□□□ 0.89
PCF11-206ENST00000533018 KIAA0753Q2KHM9 967 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 NFXL1Q6ZNB6 911 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 SESTD1Q86VW0 696 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 MB21D2Q8IYB1 491 aaPredicted RBP20.61■□□□□ 0.89
PCF11-206ENST00000533018 IL31RAQ8NI17 732 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 CAGE1Q8TC20 777 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 IGDCC4Q8TDY8 1250 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 SPATA33Q96N06 139 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 MYL10Q9BUA6 226 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 MLXIPQ9HAP2 919 aa20.61■□□□□ 0.89
PCF11-206ENST00000533018 CELF3Q5SZQ8 465 aaKnown RBP20.6■□□□□ 0.89
PCF11-206ENST00000533018 MYSM1Q5VVJ2 828 aa20.6■□□□□ 0.89
PCF11-206ENST00000533018 AFAP1L1Q8TED9 768 aa20.6■□□□□ 0.89
PCF11-206ENST00000533018 GTF2IRD1Q9UHL9 959 aa20.6■□□□□ 0.89
PCF11-206ENST00000533018 PRC1O43663 620 aa20.59■□□□□ 0.89
PCF11-206ENST00000533018 KIF5BP33176 963 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms