RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 ZNF572Q7Z3I7 529 aaPredicted RBP16.33■□□□□ 0.2
LTBP3-221ENST00000532932 RUBCNQ92622 972 aa16.33■□□□□ 0.2
LTBP3-221ENST00000532932 CDK5RAP3Q96JB5 506 aa16.33■□□□□ 0.2
LTBP3-221ENST00000532932 STX8Q9UNK0 236 aa16.33■□□□□ 0.2
LTBP3-221ENST00000532932 CCDC172P0C7W6 258 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 CCDC84Q86UT8 332 aaPredicted RBP16.32■□□□□ 0.2
LTBP3-221ENST00000532932 DDX42Q86XP3 938 aaKnown RBP eCLIP16.32■□□□□ 0.2
LTBP3-221ENST00000532932 TAF4BQ92750 862 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 CALML4Q96GE6 196 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 GOLPH3Q9H4A6 298 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 KLC4Q9NSK0 619 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 TNS2Q63HR2 1409 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 RAD51CO43502 376 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 TMOD1P28289 359 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 RAPGEF1Q13905 1077 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 GLE1Q53GS7 698 aaKnown RBP16.32■□□□□ 0.2
LTBP3-221ENST00000532932 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 PDXDC1Q6P996 788 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 SPATS2Q86XZ4 545 aaKnown RBP16.32■□□□□ 0.2
LTBP3-221ENST00000532932 CCDC13Q8IYE1 715 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 ZNF34Q8IZ26 560 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 PIK3R5Q8WYR1 880 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 DYNLL2Q96FJ2 89 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 CRNKL1Q9BZJ0 848 aaKnown RBP16.32■□□□□ 0.2
LTBP3-221ENST00000532932 GDF3Q9NR23 364 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 USP17L8P0C7I0 530 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 KLRC1P26715 233 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 NAPAP54920 295 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 GSCP56915 257 aaPredicted RBP16.32■□□□□ 0.2
LTBP3-221ENST00000532932 SV2BQ7L1I2 683 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 TBC1D5Q92609 795 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 SCLT1Q96NL6 688 aa16.32■□□□□ 0.2
LTBP3-221ENST00000532932 DCP1AQ9NPI6 582 aaPredicted RBP16.32■□□□□ 0.2
LTBP3-221ENST00000532932 USP17L3A6NCW0 530 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 USP17L4A6NCW7 530 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 POLR2FP61218 127 aaKnown RBP16.31■□□□□ 0.2
LTBP3-221ENST00000532932 SLC9C1Q4G0N8 1177 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 USP17L1Q7RTZ2 530 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 DNAAF5Q86Y56 855 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.31■□□□□ 0.2
LTBP3-221ENST00000532932 FAM170AA1A519 330 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 KCNK3O14649 394 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 HNRNPH3P31942 346 aaKnown RBP16.31■□□□□ 0.2
LTBP3-221ENST00000532932 KIAA0753Q2KHM9 967 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 RCSD1Q6JBY9 416 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 GLIS3Q8NEA6 775 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 C7orf25Q9BPX7 421 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 TBC1D7Q9P0N9 293 aa16.31■□□□□ 0.2
LTBP3-221ENST00000532932 NIP7Q9Y221 180 aaKnown RBP eCLIP16.31■□□□□ 0.2
LTBP3-221ENST00000532932 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
LTBP3-221ENST00000532932 GCOM1H8Y6P7 765 aaPredicted RBP16.3■□□□□ 0.2
LTBP3-221ENST00000532932 MYZAPP0CAP1 466 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 SFMBT2Q5VUG0 894 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 UBLCP1Q8WVY7 318 aaPredicted RBP16.3■□□□□ 0.2
LTBP3-221ENST00000532932 BAP1Q92560 729 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 LSM14BQ9BX40 385 aaKnown RBP16.3■□□□□ 0.2
LTBP3-221ENST00000532932 PACSIN1Q9BY11 444 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 MKNK2Q9HBH9 465 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 PARP4Q9UKK3 1724 aaKnown RBP16.3■□□□□ 0.2
LTBP3-221ENST00000532932 ZKSCAN4Q969J2 545 aaPredicted RBP16.3■□□□□ 0.2
LTBP3-221ENST00000532932 CYFIP2Q96F07 1278 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 FLT1P17948 1338 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 MYMKA6NI61 221 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 HMGB1P1B2RPK0 211 aaPredicted RBP16.3■□□□□ 0.2
LTBP3-221ENST00000532932 CHUKO15111 745 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 CEP104O60308 925 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 TNNC1P63316 161 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 AP1M1Q9BXS5 423 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 SLC40A1Q9NP59 571 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 ADAMTS1Q9UHI8 967 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 TSKSQ9UJT2 592 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 COL18A1P39060 1754 aa16.3■□□□□ 0.2
LTBP3-221ENST00000532932 TRAF5O00463 557 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 FAM107AO95990 144 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 CTNNA1P35221 906 aaKnown RBP16.29■□□□□ 0.2
LTBP3-221ENST00000532932 MECOMQ03112 1051 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 CENPPQ6IPU0 288 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 CUEDC2Q9H467 287 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 VCPKMTQ9H867 229 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 LUC7LQ9NQ29 371 aaKnown RBP16.29■□□□□ 0.2
LTBP3-221ENST00000532932 DCCP43146 1447 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 ORC4O43929 436 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 FGFR1OPO95684 399 aaKnown RBP16.29■□□□□ 0.2
LTBP3-221ENST00000532932 TNFRSF8P28908 595 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 WHAMMQ8TF30 809 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 ACSBG1Q96GR2 724 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 PJA2O43164 708 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
LTBP3-221ENST00000532932 E2F5Q15329 346 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 TSG101Q99816 390 aa16.29■□□□□ 0.2
LTBP3-221ENST00000532932 BIN2Q9UBW5 565 aaPredicted RBP16.29■□□□□ 0.2
LTBP3-221ENST00000532932 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
LTBP3-221ENST00000532932 TMCO5BA8MYB1 307 aa16.28■□□□□ 0.2
LTBP3-221ENST00000532932 ERVV-1B6SEH8 477 aa16.28■□□□□ 0.2
LTBP3-221ENST00000532932 NONOQ15233 471 aaKnown RBP eCLIP16.28■□□□□ 0.2
LTBP3-221ENST00000532932 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms