RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 USP40Q9NVE5 1235 aa18.74■□□□□ 0.59
VPS26B-206ENST00000531741 DDX25Q9UHL0 483 aaKnown RBP18.74■□□□□ 0.59
VPS26B-206ENST00000531741 HLA-DOAP06340 250 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 HAS1Q92839 578 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 ZC3H12CQ9C0D7 883 aaKnown RBP18.73■□□□□ 0.59
VPS26B-206ENST00000531741 ATF5Q9Y2D1 282 aaPredicted RBP18.73■□□□□ 0.59
VPS26B-206ENST00000531741 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 MYH7BA7E2Y1 1941 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 KDM3AQ9Y4C1 1321 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 LCA5LO95447 670 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 TFRCP02786 760 aaKnown RBP18.73■□□□□ 0.59
VPS26B-206ENST00000531741 EIF6P56537 245 aaKnown RBP18.73■□□□□ 0.59
VPS26B-206ENST00000531741 CKAP4Q07065 602 aaKnown RBP18.73■□□□□ 0.59
VPS26B-206ENST00000531741 TAF3Q5VWG9 929 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 NCAPH2Q6IBW4 605 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 NUDT12Q9BQG2 462 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 LACRTQ9GZZ8 138 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 NT5C3AQ9H0P0 336 aa18.73■□□□□ 0.59
VPS26B-206ENST00000531741 ATP1A1P05023 1023 aaKnown RBP18.72■□□□□ 0.59
VPS26B-206ENST00000531741 GPS2Q13227 327 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 CDC42EP5Q6NZY7 148 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 DYMQ7RTS9 669 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 KCNK18Q7Z418 384 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 NOA1Q8NC60 698 aaKnown RBP18.72■□□□□ 0.59
VPS26B-206ENST00000531741 DNAJC19Q96DA6 116 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 CCDC42Q96M95 316 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 TSG101Q99816 390 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.72■□□□□ 0.59
VPS26B-206ENST00000531741 RCCD1A6NED2 376 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 MCM3P25205 808 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 VSNL1P62760 191 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 KIF5AQ12840 1032 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 SPA17Q15506 151 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 UBE2SQ16763 222 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 APOBEC3HQ6NTF7 200 aaKnown RBP18.72■□□□□ 0.59
VPS26B-206ENST00000531741 CLEC10AQ8IUN9 316 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 TEKT1Q969V4 418 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 PSTPIP2Q9H939 334 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 ABCB6Q9NP58 842 aa18.72■□□□□ 0.59
VPS26B-206ENST00000531741 CCDC66A2RUB6 948 aa18.71■□□□□ 0.59
VPS26B-206ENST00000531741 NKRFO15226 690 aaKnown RBP eCLIP18.71■□□□□ 0.59
VPS26B-206ENST00000531741 RHOXF2BP0C7M4 288 aa18.71■□□□□ 0.59
VPS26B-206ENST00000531741 ZCWPW2Q504Y3 356 aa18.71■□□□□ 0.59
VPS26B-206ENST00000531741 TTBK2Q6IQ55 1244 aa18.71■□□□□ 0.59
VPS26B-206ENST00000531741 MKL1Q969V6 931 aa18.71■□□□□ 0.59
VPS26B-206ENST00000531741 RHOXF2Q9BQY4 288 aa18.71■□□□□ 0.59
VPS26B-206ENST00000531741 ARFGEF1Q9Y6D6 1849 aa18.71■□□□□ 0.59
VPS26B-206ENST00000531741 TARSL2A2RTX5 802 aaKnown RBP18.7■□□□□ 0.58
VPS26B-206ENST00000531741 F8W031 263 aaPredicted RBP18.7■□□□□ 0.58
VPS26B-206ENST00000531741 EIF3JO75822 258 aaKnown RBP18.7■□□□□ 0.58
VPS26B-206ENST00000531741 IDEP14735 1019 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 NPR1P16066 1061 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 USP11P51784 963 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 USP14P54578 494 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 MYOCDQ8IZQ8 938 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 MRIQ9BWK5 157 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 TRPC5Q9UL62 973 aaPredicted RBP18.7■□□□□ 0.58
VPS26B-206ENST00000531741 PCDHA12Q9UN75 941 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 CYP3A7-CYP3A51PA0A087WV96 503 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 USP17L10C9JJH3 530 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 ENC1O14682 589 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 ZNF263O14978 683 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 POLR3GO15318 223 aaPredicted RBP18.7■□□□□ 0.58
VPS26B-206ENST00000531741 USO1O60763 962 aaKnown RBP18.7■□□□□ 0.58
VPS26B-206ENST00000531741 CYP3A7P24462 503 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 COASYQ13057 564 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 ECM1Q16610 540 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 CCDC96Q2M329 555 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 MOXD1Q6UVY6 613 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 TRIM58Q8NG06 486 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 MBOAT7Q96N66 472 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 ARHGAP20Q9P2F6 1191 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 HDAC6Q9UBN7 1215 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 AFF2P51816 1311 aa18.7■□□□□ 0.58
VPS26B-206ENST00000531741 FKBP3Q00688 224 aaKnown RBP18.69■□□□□ 0.58
VPS26B-206ENST00000531741 DCAF4Q8WV16 495 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 SECISBP2LQ93073 1101 aaKnown RBP18.69■□□□□ 0.58
VPS26B-206ENST00000531741 CEP63Q96MT8 703 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 BMP2KQ9NSY1 1161 aaPredicted RBP18.69■□□□□ 0.58
VPS26B-206ENST00000531741 TFR2Q9UP52 801 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 ADAMTSL1Q8N6G6 1762 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 PRLRP16471 622 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 MCTP2Q6DN12 878 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 BAP1Q92560 729 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 ZDHHC15Q96MV8 337 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 DHX36Q9H2U1 1008 aaKnown RBP18.69■□□□□ 0.58
VPS26B-206ENST00000531741 KCNMB3Q9NPA1 279 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 NYAP2Q9P242 653 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 JRKLQ9Y4A0 524 aa18.69■□□□□ 0.58
VPS26B-206ENST00000531741 SIPA1L1O43166 1804 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 EPHB6O15197 1021 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 GNA14O95837 355 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 ALDH1B1P30837 517 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 MARSP56192 900 aaKnown RBP18.68■□□□□ 0.58
VPS26B-206ENST00000531741 CYP27A1Q02318 531 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 FAM26FQ5R3K3 315 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 MEX3CQ5U5Q3 659 aaKnown RBP18.68■□□□□ 0.58
VPS26B-206ENST00000531741 KCTD1Q719H9 257 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 C2CD5Q86YS7 1000 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms