RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TCRBV5S4A2TA0A5A2 114 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 GDF11O95390 407 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 MAP4K4O95819 1239 aaPredicted RBP8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 PDE6AP16499 860 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 BACE1P56817 501 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 RTP1P59025 263 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 ERVK-24P63145 666 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 PABPC4Q13310 644 aaKnown RBP eCLIP8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 HDAC1Q13547 482 aaPredicted RBP8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 GRIN2CQ14957 1233 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 RTN1Q16799 776 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 SWI5Q1ZZU3 235 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 ANO1Q5XXA6 986 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 SLCO4C1Q6ZQN7 724 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 GPR142Q7Z601 462 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 MAPKAPK5Q8IW41 473 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 CCDC82Q8N4S0 544 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 USP38Q8NB14 1042 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 EDARADDQ8WWZ3 215 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 SOCS4Q8WXH5 440 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 CEP63Q96MT8 703 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 HAUS7Q99871 368 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 OSBPL5Q9H0X9 879 aaPredicted RBP8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 ECHDC1Q9NTX5 307 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 PAG1Q9NWQ8 432 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 MYH1P12882 1939 aa8.43□□□□□ -1.06
TRIM53CP-201ENST00000531490 COL2A1P02458 1487 aaPredicted RBP8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 MGAMO43451 1857 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 ZNF532Q9HCE3 1301 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 BAG3O95817 575 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 CNGA1P29973 690 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 HOXA7P31268 230 aaPredicted RBP8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 CYP2C19P33261 490 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 RGS2P41220 211 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 TYRO3Q06418 890 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 MAP3K12Q12852 859 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 TTF1Q15361 905 aaPredicted RBP8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 B4GALNT3Q6L9W6 998 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 PLEKHH3Q7Z736 793 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 CCAR1Q8IX12 1150 aaKnown RBP8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 TRPV1Q8NER1 839 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 BADQ92934 168 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 PRIMPOLQ96LW4 560 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 APBA2Q99767 749 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 RIOK1Q9BRS2 568 aaKnown RBP8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 WDR18Q9BV38 432 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 DNAJC18Q9H819 358 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 PRDM5Q9NQX1 630 aaPredicted RBP8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 TMOD4Q9NZQ9 345 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 SAP30BPQ9UHR5 308 aaKnown RBP8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 PALD1Q9ULE6 856 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 ATP11BQ9Y2G3 1177 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 BDP1A6H8Y1 2624 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 FOCADQ5VW36 1801 aa8.42□□□□□ -1.06
TRIM53CP-201ENST00000531490 MYH7P12883 1935 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 CNMDO75829 334 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 FOSL2P15408 326 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 MAPK4P31152 587 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 GJC2Q5T442 439 aaPredicted RBP8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 WDR78Q5VTH9 848 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 SCARF2Q96GP6 870 aaPredicted RBP8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 NOL10Q9BSC4 688 aaKnown RBP8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 BRD7Q9NPI1 651 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 AVENQ9NQS1 362 aaPredicted RBP8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 PRR12Q9ULL5 1215 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 SIPA1L1O43166 1804 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 BAZ2AQ9UIF9 1905 aaKnown RBP8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 FLT1P17948 1338 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 SALL3Q9BXA9 1300 aa8.41□□□□□ -1.06
TRIM53CP-201ENST00000531490 TRIM43BA6NCK2 446 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 SMIM22K7EJ46 135 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 RNF225M0QZC1 329 aaPredicted RBP8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 PRKAB2O43741 272 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 PRMT3O60678 531 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 EPXP11678 715 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 ITGB8P26012 769 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 ADH6P28332 368 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 ADD2P35612 726 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 PLCD1P51178 756 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 EPHB4P54760 987 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 PCBP4P57723 403 aaKnown RBP8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 ZYXQ15942 572 aaKnown RBP8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 OCLNQ16625 522 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 HIF1AQ16665 826 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 TRIM60Q495X7 471 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 TMEM164Q5U3C3 297 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 ZNF468Q5VIY5 522 aaPredicted RBP8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 MFSD14CQ5VZR4 134 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 BTLAQ7Z6A9 289 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 SMC5Q8IY18 1101 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 LCORLQ8N3X6 602 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 NPLOC4Q8TAT6 608 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 PI4K2BQ8TCG2 481 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 FERMT2Q96AC1 680 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 TRIM43Q96BQ3 446 aaPredicted RBP8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 LNPKQ9C0E8 428 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 PUS7LQ9H0K6 701 aaKnown RBP8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 RWDD1Q9H446 243 aaPredicted RBP8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 ARMT1Q9H993 441 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 AS3MTQ9HBK9 375 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms