RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 YBX1P67809 324 aaKnown RBP5.62□□□□□ -1.51
CD44-233ENST00000531141 RAB3GAP1Q15042 981 aa5.62□□□□□ -1.51
CD44-233ENST00000531141 PLEKHN1Q494U1 663 aaPredicted RBP5.62□□□□□ -1.51
CD44-233ENST00000531141 SDE2Q6IQ49 451 aa5.62□□□□□ -1.51
CD44-233ENST00000531141 RPTNQ6XPR3 784 aa5.62□□□□□ -1.51
CD44-233ENST00000531141 CEP68Q76N32 757 aa5.62□□□□□ -1.51
CD44-233ENST00000531141 BRAPQ7Z569 592 aa5.62□□□□□ -1.51
CD44-233ENST00000531141 FEZ1Q99689 392 aa5.62□□□□□ -1.51
CD44-233ENST00000531141 EPB41L1Q9H4G0 881 aa5.62□□□□□ -1.51
CD44-233ENST00000531141 NSUN3Q9H649 340 aaKnown RBP5.62□□□□□ -1.51
CD44-233ENST00000531141 TRAF6Q9Y4K3 522 aa5.62□□□□□ -1.51
CD44-233ENST00000531141 ARVCFO00192 962 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 PEX10O60683 326 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 PPP1R11O60927 126 aaPredicted RBP5.61□□□□□ -1.51
CD44-233ENST00000531141 RFPL3O75679 317 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 MAPKAPK2P49137 400 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 GUCY1A3Q02108 690 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 CBX2Q14781 532 aaPredicted RBP5.61□□□□□ -1.51
CD44-233ENST00000531141 CHRNA2Q15822 529 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 MLANAQ16655 118 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 PLEKHG4Q58EX7 1191 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 TAF7LQ5H9L4 462 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 PRR23BQ6ZRT6 265 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 PEX11GQ96HA9 241 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 AP5M1Q9H0R1 490 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 DCP1AQ9NPI6 582 aaPredicted RBP5.61□□□□□ -1.51
CD44-233ENST00000531141 PLAAQ9Y263 795 aa5.61□□□□□ -1.51
CD44-233ENST00000531141 FAM47E-STBD1D6RA91 191 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 WNT9AO14904 365 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 SOD2P04179 222 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 NTRK1P04629 796 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 SDHBP21912 280 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 PAK1Q13153 545 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 EMC4Q5J8M3 183 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 ZC3H14Q6PJT7 736 aaKnown RBP5.6□□□□□ -1.51
CD44-233ENST00000531141 KIAA0907Q7Z7F0 614 aaPredicted RBP5.6□□□□□ -1.51
CD44-233ENST00000531141 ZNF605Q86T29 641 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 FBXO15Q8NCQ5 510 aaPredicted RBP5.6□□□□□ -1.51
CD44-233ENST00000531141 SLC7A14Q8TBB6 771 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 PANK1Q8TE04 598 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 SEC14L1Q92503 715 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 TSPAN17Q96FV3 270 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 DIRC2Q96SL1 478 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 CDIP1Q9H305 208 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 ZNF552Q9H707 407 aaPredicted RBP5.6□□□□□ -1.51
CD44-233ENST00000531141 TRIM39Q9HCM9 518 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 KLHL14Q9P2G3 628 aa5.6□□□□□ -1.51
CD44-233ENST00000531141 PPARGC1AQ9UBK2 798 aaKnown RBP5.6□□□□□ -1.51
CD44-233ENST00000531141 DBR1Q9UK59 544 aaKnown RBP5.6□□□□□ -1.51
CD44-233ENST00000531141 ARID1BQ8NFD5 2236 aaPredicted RBP5.6□□□□□ -1.51
CD44-233ENST00000531141 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.59□□□□□ -1.51
CD44-233ENST00000531141 PPP1R12AO14974 1030 aaPredicted RBP5.59□□□□□ -1.51
CD44-233ENST00000531141 SEMA7AO75326 666 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 DGKIO75912 1065 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 RAPGEF3O95398 923 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 CRTAMO95727 393 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 HSD3B2P26439 372 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 SLC9A5Q14940 896 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 TKFCQ3LXA3 575 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 TMC6Q7Z403 805 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 MAGEB10Q96LZ2 347 aaPredicted RBP5.59□□□□□ -1.51
CD44-233ENST00000531141 FMNL2Q96PY5 1086 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 ZNF652Q9Y2D9 606 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 RNF114Q9Y508 228 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 CD2APQ9Y5K6 639 aa5.59□□□□□ -1.51
CD44-233ENST00000531141 KRIT1O00522 736 aa5.58□□□□□ -1.52
CD44-233ENST00000531141 MAFKO60675 156 aa5.58□□□□□ -1.52
CD44-233ENST00000531141 RASGRP1O95267 797 aa5.58□□□□□ -1.52
CD44-233ENST00000531141 ZBTB7AO95365 584 aa5.58□□□□□ -1.52
CD44-233ENST00000531141 VIPR1P32241 457 aa5.58□□□□□ -1.52
CD44-233ENST00000531141 PABPC4Q13310 644 aaKnown RBP eCLIP5.58□□□□□ -1.52
CD44-233ENST00000531141 FAM47CQ5HY64 1035 aa5.58□□□□□ -1.52
CD44-233ENST00000531141 CYP4F22Q6NT55 531 aa5.58□□□□□ -1.52
CD44-233ENST00000531141 IPPKQ9H8X2 491 aa5.58□□□□□ -1.52
CD44-233ENST00000531141 INTS7Q9NVH2 962 aaKnown RBP5.58□□□□□ -1.52
CD44-233ENST00000531141 TEX51A0A1B0GUA7 166 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 TCRBV16S1A1N1A0A5B0 115 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 ZC3H12DA2A288 527 aaKnown RBP5.57□□□□□ -1.52
CD44-233ENST00000531141 B4E1Z4 1266 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 F8W031 263 aaPredicted RBP5.57□□□□□ -1.52
CD44-233ENST00000531141 GNAT1P11488 350 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 IGFALSP35858 605 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 SPIRE1Q08AE8 756 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 STEAP3Q658P3 488 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 FGD2Q7Z6J4 655 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 ZC3H7AQ8IWR0 971 aaKnown RBP5.57□□□□□ -1.52
CD44-233ENST00000531141 PCDH19Q8TAB3 1148 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 PHOSPHO1Q8TCT1 267 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD44-233ENST00000531141 NINJ1Q92982 152 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 FBXW5Q969U6 566 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 SCLYQ96I15 445 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 MCOLN1Q9GZU1 580 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 MAGEC2Q9UBF1 373 aaPredicted RBP5.57□□□□□ -1.52
CD44-233ENST00000531141 NUB1Q9Y5A7 615 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 PCDHA9Q9Y5H5 950 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 PCDHA8Q9Y5H6 950 aa5.57□□□□□ -1.52
CD44-233ENST00000531141 MYOCOSA0A1B0GUC4 107 aa5.56□□□□□ -1.52
CD44-233ENST00000531141 HGSO14964 777 aaPredicted RBP5.56□□□□□ -1.52
CD44-233ENST00000531141 GSTA4O15217 222 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms