RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 ANKRD23Q86SG2 305 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 IP6K1Q92551 441 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 ECT2Q9H8V3 914 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 RWDD2AQ9UIY3 292 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 PCDHA13Q9Y5I0 950 aa15.55■□□□□ 0.08
PCF11-204ENST00000530660 USO1O60763 962 aaKnown RBP15.54■□□□□ 0.08
PCF11-204ENST00000530660 ALDH3A1P30838 453 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 MAGEA10P43363 369 aaPredicted RBP15.54■□□□□ 0.08
PCF11-204ENST00000530660 BIRC3Q13489 604 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 ERMARDQ5T6L9 678 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
PCF11-204ENST00000530660 ZNF317Q96PQ6 595 aaPredicted RBP15.54■□□□□ 0.08
PCF11-204ENST00000530660 TBC1D2BQ9UPU7 963 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 HGSO14964 777 aaPredicted RBP15.54■□□□□ 0.08
PCF11-204ENST00000530660 ABCD1P33897 745 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 WASHC4Q2M389 1173 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 LMBR1LQ6UX01 489 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 LRRC34Q8IZ02 419 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 ZNF579Q8NAF0 562 aaKnown RBP15.54■□□□□ 0.08
PCF11-204ENST00000530660 ZNF507Q8TCN5 953 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 NKX1-2Q9UD57 310 aaPredicted RBP15.54■□□□□ 0.08
PCF11-204ENST00000530660 CD2APQ9Y5K6 639 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 C4BP0C0L5 1744 aa15.54■□□□□ 0.08
PCF11-204ENST00000530660 FAM205CA6NFA0 338 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 FMNL1O95466 1100 aaPredicted RBP15.53■□□□□ 0.08
PCF11-204ENST00000530660 MYL1P05976 194 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 IFIT1P09914 478 aaKnown RBP15.53■□□□□ 0.08
PCF11-204ENST00000530660 RFC5P40937 340 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 ZBED6P86452 979 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 NTRK3Q16288 839 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 KRT71Q3SY84 523 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 LRIG3Q6UXM1 1119 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 RUFY4Q6ZNE9 571 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 LONP2Q86WA8 852 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 PHC3Q8NDX5 983 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 OXER1Q8TDS5 423 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 KLHL29Q96CT2 875 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 UBAC1Q9BSL1 405 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 FBXL5Q9UKA1 691 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 MYH6P13533 1939 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 PMS1P54277 932 aaKnown RBP15.53■□□□□ 0.08
PCF11-204ENST00000530660 ERVK-9P63128 1117 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 FKBP4Q02790 459 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCF11-204ENST00000530660 TMEM62Q0P6H9 643 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 TMEM154Q6P9G4 183 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 APOA5Q6Q788 366 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 MTMR8Q96EF0 704 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 FAM129AQ9BZQ8 928 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 NEUROG2Q9H2A3 272 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 SUDS3Q9H7L9 328 aaPredicted RBP15.53■□□□□ 0.08
PCF11-204ENST00000530660 CABP5Q9NP86 173 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 PNMA2Q9UL42 364 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 PACSIN2Q9UNF0 486 aaPredicted RBP15.53■□□□□ 0.08
PCF11-204ENST00000530660 TSPOAP1O95153 1857 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 SETSIPP0DME0 302 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 CNGA1P29973 690 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 ECHS1P30084 290 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 KIAA0825Q8IV33 1275 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 TEX9Q8N6V9 391 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 MMADHCQ9H3L0 296 aaPredicted RBP15.53■□□□□ 0.08
PCF11-204ENST00000530660 ANKIB1Q9P2G1 1089 aa15.53■□□□□ 0.08
PCF11-204ENST00000530660 AFF2P51816 1311 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 A0A087WZG4 1122 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 NPTXRO95502 500 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 MSH2P43246 934 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.08
PCF11-204ENST00000530660 KLHDC7AQ5VTJ3 777 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 CYB5R4Q7L1T6 521 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 TMC4Q7Z404 712 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 RBM12BQ8IXT5 1001 aaKnown RBP15.52■□□□□ 0.08
PCF11-204ENST00000530660 DNAAF2Q9NVR5 837 aaKnown RBP15.52■□□□□ 0.08
PCF11-204ENST00000530660 DLGAP2Q9P1A6 1054 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 SWAP70Q9UH65 585 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 ANGEL1Q9UNK9 670 aaKnown RBP15.52■□□□□ 0.08
PCF11-204ENST00000530660 XDHP47989 1333 aa15.52■□□□□ 0.08
PCF11-204ENST00000530660 CYP27B1O15528 508 aa15.52■□□□□ 0.07
PCF11-204ENST00000530660 MMEP08473 750 aa15.52■□□□□ 0.07
PCF11-204ENST00000530660 PRCPP42785 496 aa15.52■□□□□ 0.07
PCF11-204ENST00000530660 IFI16Q16666 785 aaKnown RBP15.52■□□□□ 0.07
PCF11-204ENST00000530660 CCDC57Q2TAC2 916 aa15.52■□□□□ 0.07
PCF11-204ENST00000530660 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.07
PCF11-204ENST00000530660 PIGWQ7Z7B1 504 aa15.52■□□□□ 0.07
PCF11-204ENST00000530660 CMTR1Q8N1G2 835 aaKnown RBP15.52■□□□□ 0.07
PCF11-204ENST00000530660 TTYH3Q9C0H2 523 aa15.52■□□□□ 0.07
PCF11-204ENST00000530660 MARF1Q9Y4F3 1742 aaKnown RBP15.52■□□□□ 0.07
PCF11-204ENST00000530660 CHN1P15882 459 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 GNAQP50148 359 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 RILPL1Q5EBL4 403 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 ATG9AQ7Z3C6 839 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 MYH2Q9UKX2 1941 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 MMP1P03956 469 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 VIMP08670 466 aaKnown RBP15.51■□□□□ 0.07
PCF11-204ENST00000530660 ZC3H6P61129 1189 aaKnown RBP15.51■□□□□ 0.07
PCF11-204ENST00000530660 PSMD1Q99460 953 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 ESF1Q9H501 851 aaKnown RBP15.51■□□□□ 0.07
PCF11-204ENST00000530660 FAM217BQ9NTX9 383 aaPredicted RBP15.51■□□□□ 0.07
PCF11-204ENST00000530660 A0A1W2PQC6 194 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 SMAPO00193 183 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 CTDSPL2Q05D32 466 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms