RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 MAP1SQ66K74 1059 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-217ENST00000530253 ITPRIPQ8IWB1 547 aa10.93□□□□□ -0.66
CCDC90B-217ENST00000530253 MASTLQ96GX5 879 aa10.93□□□□□ -0.66
CCDC90B-217ENST00000530253 BCO2Q9BYV7 579 aa10.93□□□□□ -0.66
CCDC90B-217ENST00000530253 BICC1Q9H694 974 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-217ENST00000530253 GNAI3P08754 354 aa10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 UBTFL1P0CB47 393 aaPredicted RBP10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 HSP90B1P14625 803 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 FAM84AQ96KN4 292 aa10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 CRAMP1Q96RY5 1269 aa10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 GREM2Q9H772 168 aa10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 AKAP2Q9Y2D5 859 aa10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 SUPT16HQ9Y5B9 1047 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 LRRFIP2Q9Y608 721 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 SLX4Q8IY92 1834 aa10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 CEP350Q5VT06 3117 aa10.92□□□□□ -0.66
CCDC90B-217ENST00000530253 ARFGEF1Q9Y6D6 1849 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 MTX1Q13505 466 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 GRAPQ13588 217 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 CCDC152Q4G0S7 254 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 LMBR1LQ6UX01 489 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 ZSWIM9Q86XI8 627 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 GRAPLQ8TC17 118 aaPredicted RBP10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 RPGRQ92834 1020 aaKnown RBP10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 CELF1Q92879 486 aaKnown RBP10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 PICK1Q9NRD5 415 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 DDX19BQ9UMR2 479 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 LTBP1Q14766 1721 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 TAF1P21675 1872 aa10.91□□□□□ -0.66
CCDC90B-217ENST00000530253 CACNA1SQ13698 1873 aa10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 RFX5P48382 616 aaPredicted RBP10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 IKZF1Q13422 519 aa10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 TTLL6Q8N841 843 aa10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 GPBAR1Q8TDU6 330 aa10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 ZNF526Q8TF50 670 aaPredicted RBP10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 ZNF622Q969S3 477 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 RBM17Q96I25 401 aaKnown RBP10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 CBX8Q9HC52 389 aa10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 PRDM10Q9NQV6 1147 aa10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 ZBTB40Q9NUA8 1239 aa10.9□□□□□ -0.66
CCDC90B-217ENST00000530253 DUOX1Q9NRD9 1551 aa10.9□□□□□ -0.67
CCDC90B-217ENST00000530253 GNAI2P04899 355 aa10.89□□□□□ -0.67
CCDC90B-217ENST00000530253 ALDH1B1P30837 517 aa10.89□□□□□ -0.67
CCDC90B-217ENST00000530253 CLCN7P51798 805 aa10.89□□□□□ -0.67
CCDC90B-217ENST00000530253 ZNF252P-AS1Q0IIN9 211 aa10.89□□□□□ -0.67
CCDC90B-217ENST00000530253 KRTAP19-4Q3LI73 84 aa10.89□□□□□ -0.67
CCDC90B-217ENST00000530253 DALRD3Q5D0E6 543 aaKnown RBP10.89□□□□□ -0.67
CCDC90B-217ENST00000530253 DDX46Q7L014 1031 aaKnown RBP10.89□□□□□ -0.67
CCDC90B-217ENST00000530253 KCT2Q8NC54 265 aa10.89□□□□□ -0.67
CCDC90B-217ENST00000530253 CRBNQ96SW2 442 aa10.89□□□□□ -0.67
CCDC90B-217ENST00000530253 LRRC10BA6NIK2 292 aa10.88□□□□□ -0.67
CCDC90B-217ENST00000530253 KCNMB1Q16558 191 aa10.88□□□□□ -0.67
CCDC90B-217ENST00000530253 OLFM4Q6UX06 510 aa10.88□□□□□ -0.67
CCDC90B-217ENST00000530253 HEXIM2Q96MH2 286 aaKnown RBP10.88□□□□□ -0.67
CCDC90B-217ENST00000530253 CEP44Q9C0F1 390 aa10.88□□□□□ -0.67
CCDC90B-217ENST00000530253 SPEF2Q9C093 1822 aa10.88□□□□□ -0.67
CCDC90B-217ENST00000530253 A0A1B0GUL6 1792 aa10.88□□□□□ -0.67
CCDC90B-217ENST00000530253 PNMA6EA0A0J9YXQ4 647 aa10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 BBOX1O75936 387 aa10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 RPS8P62241 208 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 ZP2Q05996 745 aa10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 SCARA3Q6AZY7 606 aa10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 CEP85Q6P2H3 762 aa10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 STK35Q8TDR2 534 aa10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 CDC5LQ99459 802 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 CACNA2D2Q9NY47 1150 aa10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 HDAC5Q9UQL6 1122 aa10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 ATP6V0A2Q9Y487 856 aa10.87□□□□□ -0.67
CCDC90B-217ENST00000530253 ANKRD18BA2A2Z9 1011 aa10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 FANCGO15287 622 aa10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 IFIT5Q13325 482 aaKnown RBP10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 FBLN7Q53RD9 439 aa10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 PI16Q6UXB8 463 aa10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 CDC37L1Q7L3B6 337 aa10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 TMC4Q7Z404 712 aa10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 SPACA3Q8IXA5 215 aa10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 SIRT2Q8IXJ6 389 aa10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 FER1L6Q2WGJ9 1857 aa10.86□□□□□ -0.67
CCDC90B-217ENST00000530253 CENPBP07199 599 aaPredicted RBP10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 GSTT1P30711 240 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 ATP8B2P98198 1209 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 CCDC57Q2TAC2 916 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 FAM214BQ7L5A3 538 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 TMC7Q7Z402 723 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 ANKRD18AQ8IVF6 992 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 SP8Q8IXZ3 490 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 KLHDC4Q8TBB5 520 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 SSH3Q8TE77 659 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 PPP1R16BQ96T49 567 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 PUS3Q9BZE2 481 aaKnown RBP10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 LMCD1Q9NZU5 365 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 DCTN4Q9UJW0 460 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 PPM1HQ9ULR3 514 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 MAPK8IP1Q9UQF2 711 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 SBF1O95248 1867 aa10.85□□□□□ -0.67
CCDC90B-217ENST00000530253 LTBP3Q9NS15 1303 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 SRGAP3O43295 1099 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 IGHMBP2P38935 993 aaKnown RBP10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 AFMP43652 599 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 PRELPP51888 382 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms