RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 VWA3BQ502W6 1294 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 RSBN1LQ6PCB5 846 aaPredicted RBP11.92□□□□□ -0.5
PUF60-213ENST00000528999 KIAA0895Q8NCT3 520 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 EHBP1Q8NDI1 1231 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 DDX12PQ92771 950 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 KIFC2Q96AC6 838 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 CNOT6LQ96LI5 555 aaKnown RBP11.92□□□□□ -0.5
PUF60-213ENST00000528999 NOC4LQ9BVI4 516 aaKnown RBP11.92□□□□□ -0.5
PUF60-213ENST00000528999 ANO3Q9BYT9 981 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 NUCKS1Q9H1E3 243 aaKnown RBP11.92□□□□□ -0.5
PUF60-213ENST00000528999 SEMA6BQ9H3T3 888 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 HAUS4Q9H6D7 363 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 SH2D4AQ9H788 454 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 ARGLU1Q9NWB6 273 aaPredicted RBP11.92□□□□□ -0.5
PUF60-213ENST00000528999 MRFAP1Q9Y605 127 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 MYH8P13535 1937 aa11.92□□□□□ -0.5
PUF60-213ENST00000528999 TTC26A0AVF1 554 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 TRIM49BA6NDI0 452 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 PPIP5K2O43314 1243 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 NDUFB10O96000 172 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 H2AFXP16104 143 aaPredicted RBP11.91□□□□□ -0.5
PUF60-213ENST00000528999 CYLC1P35663 651 aaPredicted RBP11.91□□□□□ -0.5
PUF60-213ENST00000528999 ARHGAP4P98171 946 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 FKBP3Q00688 224 aaKnown RBP11.91□□□□□ -0.5
PUF60-213ENST00000528999 MAN2A1Q16706 1144 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 UBE2SQ16763 222 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 AOC3Q16853 763 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 ARHGAP29Q52LW3 1261 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 PPP4R3CPQ6ZMV5 832 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 FAM83AQ86UY5 434 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 MYOCDQ8IZQ8 938 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 TXLNBQ8N3L3 684 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 GPR161Q8N6U8 529 aaKnown RBP11.91□□□□□ -0.5
PUF60-213ENST00000528999 TTLL6Q8N841 843 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 CEP112Q8N8E3 955 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 AGBL3Q8NEM8 1001 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 SLC16A10Q8TF71 515 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 DNAJC19Q96DA6 116 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 PRMT6Q96LA8 375 aaPredicted RBP11.91□□□□□ -0.5
PUF60-213ENST00000528999 CAMKK2Q96RR4 588 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 GMLQ99445 158 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 TTYH3Q9C0H2 523 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
PUF60-213ENST00000528999 EHMT1Q9H9B1 1298 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 GOPCQ9HD26 462 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 GINM1Q9NU53 330 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 DDX41Q9UJV9 622 aaKnown RBP11.91□□□□□ -0.5
PUF60-213ENST00000528999 TMX2Q9Y320 296 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
PUF60-213ENST00000528999 FRMD3A2A2Y4 597 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 CTAGE9A4FU28 777 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 SPDYE2BA6NHP3 402 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 SPDYE3A6NKU9 549 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 EIF3CLB5ME19 914 aaKnown RBP11.9□□□□□ -0.5
PUF60-213ENST00000528999 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 TADA3O75528 432 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 NDUFA10O95299 355 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 SPDYE6P0CI01 402 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 FCER1AP12319 257 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 RPA1P27694 616 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 MARSP56192 900 aaKnown RBP11.9□□□□□ -0.5
PUF60-213ENST00000528999 ERVK-24P63145 666 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 MAP3K10Q02779 954 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 DLGAP5Q15398 846 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 PTPN21Q16825 1174 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 MSL1Q68DK7 614 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 FAM160B2Q86V87 743 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 CLEC10AQ8IUN9 316 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 CREBRFQ8IUR6 639 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 OGFOD1Q8N543 542 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 SAMD3Q8N6K7 520 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 RABGGTAQ92696 567 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 WDR24Q96S15 920 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 CSRNP1Q96S65 589 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 EIF3CQ99613 913 aaKnown RBP11.9□□□□□ -0.5
PUF60-213ENST00000528999 POLR3CQ9BUI4 534 aaPredicted RBP11.9□□□□□ -0.5
PUF60-213ENST00000528999 DEFB129Q9H1M3 183 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 MRPL44Q9H9J2 332 aaKnown RBP11.9□□□□□ -0.5
PUF60-213ENST00000528999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.9□□□□□ -0.5
PUF60-213ENST00000528999 SLC39A2Q9NP94 309 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 CDC23Q9UJX2 597 aa11.9□□□□□ -0.5
PUF60-213ENST00000528999 POTEMA6NI47 508 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 B4DLN1 442 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 IPO7O95373 1038 aaKnown RBP11.89□□□□□ -0.51
PUF60-213ENST00000528999 GH2P01242 217 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 PLA2G4BP0C869 781 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 TRIM21P19474 475 aaKnown RBP11.89□□□□□ -0.51
PUF60-213ENST00000528999 CHRNA5P30532 468 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 FAM193AP78312 1265 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 BMS1Q14692 1282 aaKnown RBP11.89□□□□□ -0.51
PUF60-213ENST00000528999 MTF1Q14872 753 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 WHAMMP3Q1A5X7 153 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 MIIPQ5JXC2 388 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
PUF60-213ENST00000528999 ETNPPLQ8TBG4 499 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 SYN2Q92777 582 aaPredicted RBP11.89□□□□□ -0.51
PUF60-213ENST00000528999 NUDT12Q9BQG2 462 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms